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IMGVR_UViG_3300026882_000104-3300026882-Ga0208313_10007940

Arc-Vir

IMGVR_UViG_3300026882_000104-3300026882-Ga0208313_10007940

Quality

78.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-129
PDB
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1lddA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.85 46.0 5.99e-01 70.6% 91.9%
4mtdD01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 44.0 5.23e-01 71.4% 73.9%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 47.0 5.74e-01 77.0% 87.8%
3o2pE00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 44.0 5.27e-01 71.4% 77.9%
2xrnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 42.0 5.81e-01 73.8% 100.0%
1q1hA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 44.0 5.28e-01 72.2% 80.0%
4o5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 45.0 5.88e-01 81.0% 98.6%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 50.0 5.70e-01 78.6% 83.3%
2ma3A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 42.0 5.02e-01 71.4% 76.1%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 51.0 5.42e-01 81.0% 75.0%
7dvrA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 46.0 4.46e-01 78.6% 53.9%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 46.0 5.08e-01 79.4% 75.0%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 50.0 5.28e-01 79.4% 73.9%
3x1oA00 1.20.120.1790 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.73 51.0 4.87e-01 85.7% 61.1%
2qbyB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 47.0 5.47e-01 77.8% 93.4%
3bz6A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 46.0 5.35e-01 74.6% 92.2%
1vtnC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 52.0 5.73e-01 85.7% 95.1%
2qbyA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 46.0 5.33e-01 77.8% 93.3%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 44.0 5.13e-01 80.2% 92.0%
2zj2A03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 45.0 5.34e-01 81.0% 100.0%
1t98A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 42.0 4.94e-01 75.4% 90.8%
1ni5A02 1.20.59.20 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › 0.67 38.0 4.41e-01 96.0% 79.1%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 47.0 4.62e-01 84.9% 67.2%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.65 40.0 4.70e-01 70.6% 93.8%
7xc2A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 43.0 4.66e-01 78.6% 80.2%
2lh9A00 3.30.420.610 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like 0.64 40.0 4.90e-01 77.0% 100.0%
1x42A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.59 31.0 3.67e-01 86.5% 74.7%
2ysrA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 4.31e-01 73.8% 89.5%
5tgtA02 1.10.10.350 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.54 35.0 3.60e-01 81.7% 67.5%
2be4A02 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 33.0 3.59e-01 81.7% 75.2%
2v4jB03 3.30.70.20 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 27.0 3.41e-01 75.4% 89.2%
2f33A01 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.53 31.0 3.84e-01 75.4% 100.0%
2iw2A02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.51 40.0 3.07e-01 81.7% 58.2%
3biqA02 3.90.230.10 Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily 0.50 39.0 3.03e-01 82.5% 43.8%
1sxjB03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.50 34.0 3.80e-01 96.0% 93.5%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4946048 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.87 53.0 6.56e-01 77.8% 96.2%
5012514 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 42.0 5.14e-01 70.6% 72.3%
3398923 101.1.2.248 alpha arrays › HTH › HTH › winged helix domain › DUF4777 0.85 47.0 5.94e-01 74.6% 87.5%
3701463 101.1.2.127 alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.83 44.0 5.25e-01 70.6% 76.5%
4976651 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 46.0 6.10e-01 70.6% 100.0%
4980135 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 50.0 5.44e-01 77.0% 71.3%
3501318 101.1.2.394 alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.81 52.0 3.58e-01 73.8% 21.0%
5074322 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 45.0 5.58e-01 73.0% 87.3%
3479827 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.80 46.0 5.39e-01 73.0% 80.7%
4024318 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 51.0 6.18e-01 78.6% 97.6%
5073218 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 44.0 5.18e-01 73.8% 77.8%
5077851 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.78 53.0 4.97e-01 81.0% 58.0%
5062871 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 47.0 5.36e-01 77.8% 81.1%
3393016 101.1.2.526 alpha arrays › HTH › HTH › winged helix domain › PF27602 0.77 44.0 5.57e-01 74.6% 94.7%
4109840 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.76 52.0 5.81e-01 79.4% 89.0%
4358890 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.75 51.0 5.38e-01 78.6% 76.5%
4933807 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 46.0 5.49e-01 73.8% 91.8%
5005164 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.74 52.0 5.61e-01 81.0% 84.3%
5000349 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 50.0 5.18e-01 79.4% 73.3%
3729991 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.73 51.0 5.52e-01 81.7% 84.8%
5045315 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 50.0 5.21e-01 77.8% 75.7%
5053839 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 38.0 4.73e-01 73.0% 82.7%
3739675 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 51.0 5.44e-01 78.6% 81.8%
4979490 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 50.0 5.16e-01 79.4% 74.2%
4392375 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.72 51.0 5.42e-01 80.2% 81.8%
4974161 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.72 51.0 5.15e-01 80.2% 72.6%
5073929 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.72 50.0 5.33e-01 79.4% 80.9%
4983039 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.72 49.0 5.50e-01 79.4% 88.9%
2417725 101.1.2.467 alpha arrays › HTH › HTH › winged helix domain › WHD_Rok 0.72 42.0 4.57e-01 76.2% 69.9%
5026783 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.72 49.0 5.48e-01 80.2% 89.0%
5005295 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 49.0 4.92e-01 80.2% 68.5%
5036311 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 49.0 5.39e-01 79.4% 88.0%
4933997 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 50.0 5.15e-01 80.2% 75.8%
5003874 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 51.0 5.22e-01 79.4% 77.5%
4373647 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 50.0 5.17e-01 80.2% 76.7%
4672256 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 51.0 5.30e-01 80.2% 80.9%
4284507 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.71 50.0 5.44e-01 79.4% 87.6%
3167709 101.1.2.166 alpha arrays › HTH › HTH › winged helix domain › MCM6_C 0.70 53.0 5.52e-01 77.0% 87.8%
4966155 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.70 50.0 5.17e-01 80.2% 77.5%
4945942 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 49.0 5.23e-01 80.2% 82.7%
3581108 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 51.0 5.21e-01 78.6% 78.3%
3946676 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 50.0 5.38e-01 81.0% 85.5%
5071551 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 44.0 5.02e-01 78.6% 85.3%
3645078 101.1.2.386 alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.70 46.0 4.89e-01 78.6% 76.4%
3597393 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 43.0 4.10e-01 72.2% 52.7%
3173225 101.1.2.4 alpha arrays › HTH › HTH › winged helix domain › Forkhead 0.69 53.0 5.19e-01 85.7% 74.1%
4487383 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 48.0 5.16e-01 77.8% 81.8%
4966192 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 50.0 5.22e-01 80.2% 81.7%
4982781 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 48.0 5.13e-01 79.4% 81.8%
4979847 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.69 53.0 4.53e-01 80.2% 80.5%
4961270 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 48.0 5.25e-01 79.4% 86.7%
4602598 101.1.2.147 alpha arrays › HTH › HTH › winged helix domain › ORC4_C 0.69 51.0 5.17e-01 80.2% 77.6%
4008765 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.69 52.0 5.58e-01 82.5% 91.7%
5065308 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 51.0 5.22e-01 80.2% 80.8%
5047341 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 47.0 5.09e-01 81.0% 83.8%
4956520 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 48.0 5.06e-01 79.4% 81.8%
5011183 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 50.0 5.31e-01 80.2% 86.4%
4948099 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 50.0 5.35e-01 80.2% 87.3%
3254841 101.1.2.198 alpha arrays › HTH › HTH › winged helix domain › ORC1_wHTH 0.68 48.0 5.26e-01 78.6% 87.6%
5050129 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 50.0 5.34e-01 80.2% 87.3%
4173782 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.68 49.0 5.18e-01 80.2% 82.6%
None 0.67 46.0 5.15e-01 78.6% 88.0%
4943364 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 49.0 4.97e-01 80.2% 76.4%
4955909 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 49.0 5.19e-01 80.2% 85.5%
5077356 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 52.0 5.25e-01 81.0% 80.8%
4975513 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.67 49.0 5.21e-01 80.2% 86.4%
4971999 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.67 51.0 5.12e-01 80.2% 79.2%
3927517 101.1.2.101 alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.66 47.0 5.23e-01 78.6% 92.0%
3262459 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 45.0 4.94e-01 70.6% 87.6%
3244600 101.1.2.178 alpha arrays › HTH › HTH › winged helix domain › HTH_61 0.65 50.0 5.48e-01 81.0% 99.0%
5029320 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 35.0 4.52e-01 70.6% 100.0%
3605731 101.1.2.291 alpha arrays › HTH › HTH › winged helix domain › La_HTH_kDCL 0.64 46.0 4.95e-01 73.0% 95.2%
3396990 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 41.0 4.87e-01 73.0% 100.0%
5054826 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.63 42.0 4.96e-01 81.0% 95.6%
5029501 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.63 48.0 4.66e-01 81.0% 72.1%
3167302 101.1.2.86 alpha arrays › HTH › HTH › winged helix domain › SMC_Nse1 0.62 44.0 4.95e-01 72.2% 98.9%
5056343 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 47.0 4.78e-01 82.5% 79.2%
3829946 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.62 46.0 4.28e-01 79.4% 61.3%
5051570 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 46.0 4.78e-01 78.6% 87.8%
3791819 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.61 31.0 3.76e-01 75.4% 75.0%
4584775 101.1.2.198 alpha arrays › HTH › HTH › winged helix domain › ORC1_wHTH 0.58 43.0 4.14e-01 78.6% 87.6%
4024221 108.1.1.29 alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_7 0.57 38.0 4.23e-01 84.9% 85.0%
3168706 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.56 40.0 4.22e-01 74.6% 93.9%
3298593 109.4.1.43 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SAC3_GANP 0.53 42.0 3.32e-01 84.9% 41.5%