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IMGVR_UViG_3300026885_000023-3300026885-Ga0208662_1015961
Arc-VirIMGVR_UViG_3300026885_000023-3300026885-Ga0208662_1015961
Identity
- Kingdom:
- archaea
Quality
74.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-72
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1nrwA02 | 3.30.1240.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › | 0.71 | 45.0 | 3.60e-01 | 72.1% | 33.8% |
| 1whuA00 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.71 | 53.0 | 4.59e-01 | 79.4% | 56.7% |
| 3p2mA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.70 | 44.0 | 2.86e-01 | 95.6% | 15.3% |
| 2khmA01 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.62 | 48.0 | 4.14e-01 | 85.3% | 55.6% |
| 1csmA00 | 1.10.590.10 | Mainly Alpha › Orthogonal Bundle › Chorismate Mutase, subunit A › Chorismate mutase, AroQ class superfamily, eukaryotic | 0.60 | 45.0 | 3.13e-01 | 83.8% | 92.5% |
| 2yhsA01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.52 | 44.0 | 4.00e-01 | 100.0% | 69.1% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3839206 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.79 | 56.0 | 5.25e-01 | 79.4% | 62.5% |
| 3991872 | 632.22.1.7 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › Membralin | 0.70 | 49.0 | 4.61e-01 | 76.5% | 58.8% |
| 3243101 | 6026.1.1.0 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain | 0.66 | 43.0 | 3.67e-01 | 70.6% | 40.0% |
| 4579424 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.66 | 47.0 | 3.29e-01 | 77.9% | 22.9% |
| 3714100 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.65 | 54.0 | 5.44e-01 | 94.1% | 100.0% |
| 3613282 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.63 | 43.0 | 3.32e-01 | 70.6% | 40.7% |
| 3806394 | 152.1.2.0 ↗ | alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit | 0.58 | 46.0 | 4.36e-01 | 85.3% | 73.8% |
| 4858006 | 191.1.1.11 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_7 | 0.57 | 42.0 | 4.08e-01 | 79.4% | 90.9% |