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IMGVR_UViG_3300026885_000046-3300026885-Ga0208662_10011244

Arc-Vir

IMGVR_UViG_3300026885_000046-3300026885-Ga0208662_10011244

Quality

68.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-99
PDB
Domain cluster: representative
CATH (31)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3dcxA00 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.69 42.0 4.00e-01 75.3% 51.3%
2ovsA00 2.40.128.380 Mainly Beta › Beta Barrel › Lipocalin › T3SS negative regulator GrlR 0.66 43.0 4.05e-01 95.9% 54.2%
2wyhB06 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.64 49.0 3.53e-01 82.5% 51.6%
2b5nB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 51.0 3.53e-01 97.9% 26.8%
3b77A01 2.30.29.50 Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain 0.62 40.0 4.03e-01 79.4% 64.0%
6jhpA01 2.70.98.60 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis 0.62 48.0 3.37e-01 82.5% 51.9%
1ki1B02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 42.0 3.66e-01 70.1% 62.0%
2cw9A00 3.10.450.240 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 47.0 3.85e-01 85.6% 78.6%
1hxnA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.58 43.0 3.34e-01 81.4% 36.2%
3w0fA01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.58 45.0 4.24e-01 83.5% 92.4%
1k82B01 3.20.190.10 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal 0.57 44.0 4.07e-01 83.5% 92.9%
5tf2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 50.0 3.42e-01 96.9% 29.9%
2z0fA04 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.56 39.0 3.87e-01 86.6% 67.6%
6qk7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 49.0 3.29e-01 92.8% 29.2%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 46.0 3.22e-01 91.8% 40.9%
2b5lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 51.0 3.35e-01 100.0% 35.6%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.55 33.0 3.36e-01 81.4% 59.6%
3u4yA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 48.0 3.30e-01 95.9% 34.8%
3afcA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 47.0 3.00e-01 95.9% 31.7%
5f7uA02 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.54 42.0 3.21e-01 83.5% 38.9%
2xvlA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.54 42.0 3.17e-01 83.5% 40.6%
3dfgA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 27.0 3.50e-01 89.7% 95.8%
7uhyA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 3.21e-01 94.8% 34.8%
7apkF01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 47.0 3.20e-01 95.9% 32.9%
4ba0A01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.53 42.0 3.29e-01 84.5% 45.2%
1p6pA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 40.0 3.70e-01 82.5% 91.2%
2f2hA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.52 40.0 3.03e-01 83.5% 42.9%
3nrlA00 2.40.10.390 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.52 29.0 3.32e-01 90.7% 76.5%
8es5A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 41.0 3.66e-01 85.6% 63.8%
1itvA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.51 43.0 3.44e-01 92.8% 47.2%
2oerA00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.50 39.0 3.29e-01 86.6% 68.2%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3283795 220.1.1.17 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_1 0.72 45.0 4.27e-01 75.3% 53.0%
4965302 7089.1.1.8 a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › PF25912 0.71 44.0 4.56e-01 86.6% 66.7%
3711234 5.1.4.175 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT122_2nd 0.69 50.0 3.57e-01 80.4% 27.5%
None 0.69 49.0 3.50e-01 79.4% 27.2%
3404770 5.1.4.175 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT122_2nd 0.68 49.0 3.49e-01 80.4% 27.0%
3476810 5.1.4.175 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT122_2nd 0.66 48.0 3.50e-01 80.4% 29.2%
135359 220.1.1.17 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_1 0.66 42.0 3.87e-01 75.3% 49.6%
4943079 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 46.0 3.90e-01 73.2% 46.5%
3569201 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.64 56.0 3.68e-01 94.8% 32.0%
3332318 331.2.1.11 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › COR-B 0.63 41.0 3.29e-01 85.6% 33.7%
3592141 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.63 49.0 4.07e-01 90.7% 49.1%
1141835 220.1.1.17 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_1 0.62 40.0 3.77e-01 79.4% 52.9%
4030034 109.4.1.1140 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_PEP5_VPS11 0.61 53.0 3.30e-01 92.8% 22.8%
3793856 5.1.4.421 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st, Beta-prop_IFT140_2nd 0.60 53.0 3.13e-01 95.9% 14.6%
3249767 3939.1.1.0 alpha duplicates or obligate multimers › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain › XRCC4 C-terminal oligomerization domain 0.60 53.0 3.41e-01 95.9% 25.1%
3484052 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 53.0 3.54e-01 97.9% 30.1%
3596724 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 52.0 3.38e-01 95.9% 30.2%
3475508 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 51.0 3.29e-01 92.8% 22.4%
3508282 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.59 52.0 3.43e-01 97.9% 24.2%
4029821 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.59 50.0 3.79e-01 92.8% 56.5%
3781776 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 51.0 3.48e-01 92.8% 43.4%
2576776 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.58 53.0 3.70e-01 99.0% 39.1%
3211395 5.1.4.102 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 0.58 51.0 3.59e-01 95.9% 37.7%
3790115 5.1.4.341 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd 0.58 50.0 3.29e-01 92.8% 27.4%
3789793 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 50.0 2.90e-01 92.8% 13.2%
3215377 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.58 51.0 3.44e-01 96.9% 35.9%
4030728 5.1.4.661 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st 0.57 50.0 3.38e-01 95.9% 30.7%
3786489 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 49.0 3.30e-01 92.8% 32.1%
3246345 5.1.4.341 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd 0.57 50.0 3.49e-01 94.8% 34.1%
3404226 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 51.0 3.50e-01 95.9% 34.6%
3549654 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.57 50.0 2.79e-01 94.8% 12.2%
3586726 5.1.4.421 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st, Beta-prop_IFT140_2nd 0.57 50.0 3.51e-01 94.8% 36.6%
3390301 5.1.4.102 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_3 0.57 50.0 3.54e-01 95.9% 36.6%
3591184 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 50.0 3.27e-01 95.9% 37.2%
5080350 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.57 50.0 3.42e-01 95.9% 31.9%
3241422 3755.3.1.627 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CNH 0.57 49.0 3.11e-01 95.9% 21.4%
3225189 5.1.4.369 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, Beta-prop_EMC1_N 0.57 50.0 2.91e-01 95.9% 11.8%
3309559 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.57 50.0 3.58e-01 95.9% 38.1%
4626423 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.56 50.0 3.40e-01 95.9% 34.9%
3931222 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.56 49.0 3.41e-01 94.8% 35.6%
3613795 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 49.0 3.14e-01 95.9% 31.2%
3240374 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.56 49.0 3.39e-01 95.9% 33.2%
3403536 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 49.0 3.50e-01 95.9% 38.3%
3938142 331.2.1.0 a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain 0.56 35.0 2.77e-01 85.6% 27.7%
3739291 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.56 49.0 3.43e-01 96.9% 39.0%
3615587 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.56 49.0 3.43e-01 94.8% 36.3%
3744900 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 50.0 3.51e-01 97.9% 36.7%
3885183 3504.2.1.1 beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins › Fapy_DNA_glyco 0.56 44.0 3.98e-01 84.5% 90.8%
3990350 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.55 50.0 3.42e-01 96.9% 32.1%
3344355 5.1.4.227 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_At4g14310 0.55 48.0 3.14e-01 95.9% 30.5%
3743579 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.55 47.0 3.28e-01 92.8% 40.7%
3629277 5.1.5.89 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF31099 0.55 48.0 3.11e-01 95.9% 31.3%
3410220 5.1.4.218 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT80_2nd 0.54 47.0 3.36e-01 94.8% 43.8%
3990517 5.1.4.502 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_IFT80_2nd 0.54 48.0 2.97e-01 95.9% 18.0%
3413325 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 47.0 3.13e-01 94.8% 35.8%
3514010 5.1.4.218 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT80_2nd 0.54 47.0 3.34e-01 96.9% 32.3%
3439828 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 47.0 3.23e-01 95.9% 31.7%
None 0.53 46.0 3.95e-01 92.8% 65.8%
5043489 3504.2.1.0 beta barrels › MutM N-terminal domain-like › N-terminal domain of MutM-like DNA repair proteins › N-terminal domain of MutM-like DNA repair proteins 0.53 42.0 3.90e-01 83.5% 91.7%
3793300 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.53 46.0 2.99e-01 95.9% 28.8%
3491346 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 47.0 3.17e-01 95.9% 32.9%
3391006 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 46.0 3.15e-01 92.8% 36.9%
3960238 331.3.1.2 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A 0.53 43.0 3.47e-01 85.6% 60.6%
3711659 5.1.4.218 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT80_2nd 0.53 46.0 3.30e-01 95.9% 38.3%
3813186 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 47.0 3.02e-01 95.9% 26.3%
3659020 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 47.0 3.27e-01 99.0% 33.5%
4137479 101.15.1.1 alpha arrays › HTH › LysM domain › LysM domain › LysM 0.53 38.0 4.09e-01 75.3% 95.3%
3282852 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.53 41.0 3.57e-01 85.6% 54.8%
3174934 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.52 46.0 3.20e-01 95.9% 33.7%
4479826 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 46.0 3.15e-01 95.9% 33.4%
3508002 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 46.0 3.30e-01 95.9% 42.5%
3286489 12.3.1.19 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 0.52 41.0 3.21e-01 84.5% 44.3%
3643255 5.1.4.222 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta_prop_At2g24240 0.52 46.0 3.12e-01 97.9% 29.1%
3743479 5.1.4.351 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_SPT8 0.52 44.0 2.84e-01 92.8% 20.7%
3962822 331.3.1.2 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Ring_hydroxyl_A 0.52 35.0 3.10e-01 71.1% 49.6%
3632804 5.1.4.661 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st 0.51 45.0 2.96e-01 95.9% 26.8%
3269700 5.1.4.8 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.50 44.0 3.12e-01 96.9% 32.5%
D2 high residues 114-201
PDB