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IMGVR_UViG_3300026885_000047-3300026885-Ga0208662_10142110

Arc-Vir

IMGVR_UViG_3300026885_000047-3300026885-Ga0208662_10142110

Quality

90.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-64
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05496.19 best RuvB_N 28.9 1.20e-06 96.6% 30.2%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1g41A01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.85 76.0 5.24e-01 100.0% 35.8%
1z90B01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.75 57.0 3.50e-01 81.4% 15.9%
3fvvA02 1.20.1440.100 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › SG protein - dephosphorylation function 0.58 42.0 3.98e-01 79.7% 84.0%
5cegD00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.51 41.0 3.53e-01 91.5% 85.1%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4990741 102.1.2.0 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase 0.63 50.0 3.16e-01 86.4% 27.8%
3433813 7550.1.1.1 a/b three-layered sandwiches › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › Tetrapyrrole methylase N-terminal domain › TP_methylase 0.59 41.0 3.63e-01 74.6% 48.9%
3531698 196.1.1.1 alpha bundles › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › Regulator of G-protein signaling, RGS › RGS 0.56 42.0 3.26e-01 83.1% 80.7%