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IMGVR_UViG_3300026885_000068-3300026885-Ga0208662_1005599
Arc-VirIMGVR_UViG_3300026885_000068-3300026885-Ga0208662_1005599
Identity
- Kingdom:
- archaea
Quality
90.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-103
Domain cluster:
rep: IMGVR_UViG_3300005977_000003-3300005977-Ga0081474_11704770__D2-71
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yqfB00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.65 | 49.0 | 3.93e-01 | 79.4% | 42.9% |
| 2ra8A01 | 2.20.140.10 | Mainly Beta › Single Sheet › q64v53_bacfr protein fold › WGR domain | 0.59 | 40.0 | 4.51e-01 | 82.5% | 91.9% |
| 4eqaC00 | 2.40.128.650 | Mainly Beta › Beta Barrel › Lipocalin › | 0.59 | 45.0 | 3.94e-01 | 82.5% | 96.7% |
| 4ci8A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 52.0 | 3.57e-01 | 96.9% | 80.4% |
| 3u2gA02 | 2.60.98.40 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › DU1608 C-terminal domain | 0.58 | 45.0 | 4.13e-01 | 82.5% | 79.8% |
| 2qm4A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.57 | 40.0 | 3.53e-01 | 71.1% | 79.0% |
| 2mqdA00 | 3.30.1460.60 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.57 | 49.0 | 4.57e-01 | 95.9% | 74.8% |
| 1b9vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.57 | 51.0 | 3.43e-01 | 100.0% | 83.8% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.57 | 44.0 | 3.86e-01 | 85.6% | 78.6% |
| 7mhuA01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.56 | 49.0 | 3.30e-01 | 95.9% | 77.2% |
| 1inyA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.56 | 49.0 | 3.32e-01 | 99.0% | 84.0% |
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.56 | 40.0 | 3.81e-01 | 99.0% | 61.9% |
| 2qi2A02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.55 | 41.0 | 3.94e-01 | 79.4% | 93.0% |
| 1p6pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 44.0 | 4.08e-01 | 87.6% | 100.0% |
| 1c9rA04 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.55 | 40.0 | 3.89e-01 | 76.3% | 89.7% |
| 5ly3A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 50.0 | 3.87e-01 | 100.0% | 95.1% |
| 3nvqA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 46.0 | 3.04e-01 | 95.9% | 91.5% |
| 3obwA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.54 | 45.0 | 4.25e-01 | 100.0% | 74.6% |
| 3djcB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 43.0 | 4.51e-01 | 100.0% | 95.5% |
| 3nuwA01 | 3.30.420.300 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, substrate binding domain | 0.53 | 38.0 | 3.99e-01 | 75.3% | 97.8% |
| 4h0aA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.53 | 39.0 | 2.84e-01 | 78.4% | 86.0% |
| 3qwmA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 42.0 | 3.83e-01 | 84.5% | 73.2% |
| 4o9dA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 46.0 | 3.07e-01 | 95.9% | 61.4% |
| 3dsmA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 45.0 | 3.14e-01 | 93.8% | 82.9% |
| 1sil000 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 44.0 | 3.09e-01 | 96.9% | 88.7% |
| 1hdhA02 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.52 | 37.0 | 4.02e-01 | 99.0% | 92.2% |
| 5gm0A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 46.0 | 4.04e-01 | 100.0% | 84.5% |
| 1t6cA02 | 3.30.420.150 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Exopolyphosphatase. Domain 2 | 0.52 | 43.0 | 3.53e-01 | 90.7% | 92.8% |
| 4ozuA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 43.0 | 3.01e-01 | 93.8% | 81.3% |
| 3wxmB02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.52 | 45.0 | 4.19e-01 | 100.0% | 75.4% |
| 2qzuA02 | 3.30.1120.10 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.52 | 37.0 | 3.99e-01 | 76.3% | 98.8% |
| 2xqyA01 | 3.30.500.50 | Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › | 0.51 | 42.0 | 3.56e-01 | 93.8% | 86.5% |
| 1sazA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 46.0 | 3.76e-01 | 100.0% | 64.8% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4082107 | 7089.1.1.3 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › MmoD | 0.73 | 42.0 | 4.82e-01 | 75.3% | 78.6% |
| 3609492 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.64 | 45.0 | 3.97e-01 | 77.3% | 50.7% |
| 1567525 | 3842.1.1.1 ↗ | a+b two layers › Uncharacterized protein Rv3902c › Uncharacterized protein Rv3902c › Uncharacterized protein Rv3902c › Imm61 | 0.64 | 46.0 | 3.79e-01 | 85.6% | 41.7% |
| 4964031 | 7089.1.1.7 ↗ | a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › DUF7543 | 0.64 | 44.0 | 5.07e-01 | 81.4% | 98.6% |
| 3704328 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.63 | 43.0 | 4.60e-01 | 76.3% | 80.7% |
| 3230371 | 3180.1.1.0 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related | 0.63 | 57.0 | 5.45e-01 | 97.9% | 90.9% |
| 4015961 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.62 | 49.0 | 3.18e-01 | 85.6% | 64.7% |
| 4988423 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.62 | 42.0 | 4.57e-01 | 84.5% | 85.0% |
| 3224967 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.61 | 56.0 | 4.10e-01 | 100.0% | 49.0% |
| 3233897 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 54.0 | 5.06e-01 | 97.9% | 80.8% |
| 3242479 | 2484.1.1.190 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FBA_2 | 0.60 | 54.0 | 3.83e-01 | 97.9% | 36.1% |
| 4662378 | 1032.1.1.0 ↗ | alpha arrays › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain | 0.60 | 46.0 | 2.64e-01 | 80.4% | 9.8% |
| 1034013 | 4210.1.1.1 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain › WGR | 0.60 | 41.0 | 4.50e-01 | 84.5% | 88.5% |
| 3242741 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.60 | 55.0 | 3.95e-01 | 100.0% | 46.4% |
| 3945440 | 2484.1.1.60 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_E_G | 0.59 | 43.0 | 4.25e-01 | 76.3% | 82.9% |
| 3218903 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.59 | 53.0 | 4.12e-01 | 100.0% | 59.0% |
| 3536576 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.58 | 42.0 | 4.48e-01 | 100.0% | 85.9% |
| 3268322 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.58 | 48.0 | 3.27e-01 | 89.7% | 71.9% |
| 3605319 | 5.1.4.238 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7048 | 0.58 | 53.0 | 3.47e-01 | 100.0% | 81.2% |
| 3402824 | 5.1.4.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 | 0.58 | 47.0 | 3.12e-01 | 88.7% | 82.7% |
| 2702071 | 5.1.3.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur | 0.58 | 50.0 | 3.40e-01 | 97.9% | 82.7% |
| 144144 | 5.1.3.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur | 0.58 | 51.0 | 3.45e-01 | 100.0% | 92.9% |
| 5013346 | 241.1.1.30 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF26556 | 0.58 | 44.0 | 3.86e-01 | 80.4% | 71.4% |
| 3596915 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.57 | 45.0 | 2.72e-01 | 81.4% | 30.0% |
| 3709736 | 5.1.4.238 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF7048 | 0.57 | 49.0 | 3.31e-01 | 94.8% | 53.8% |
| 5048797 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.57 | 44.0 | 4.47e-01 | 84.5% | 88.4% |
| 3591998 | 220.1.1.11 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Rpn13_ADRM1_Pru | 0.56 | 44.0 | 4.25e-01 | 83.5% | 88.2% |
| 3501432 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 40.0 | 3.94e-01 | 76.3% | 88.2% |
| 3711016 | 5.1.4.21 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Pep3_Vps18 | 0.56 | 46.0 | 3.24e-01 | 89.7% | 78.7% |
| 4243201 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.56 | 49.0 | 4.03e-01 | 100.0% | 64.9% |
| 4959571 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.55 | 43.0 | 3.15e-01 | 82.5% | 54.3% |
| 5039391 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 47.0 | 3.09e-01 | 95.9% | 61.6% |
| 3605675 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 48.0 | 3.12e-01 | 95.9% | 85.3% |
| 3631256 | 5.1.4.169 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd | 0.55 | 45.0 | 3.04e-01 | 89.7% | 70.4% |
| 3643307 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.55 | 40.0 | 3.73e-01 | 77.3% | 84.8% |
| 3546306 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.55 | 41.0 | 4.22e-01 | 100.0% | 82.1% |
| 4956163 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.54 | 47.0 | 3.84e-01 | 94.8% | 81.7% |
| 4927832 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.54 | 43.0 | 4.14e-01 | 85.6% | 93.6% |
| 5013238 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 44.0 | 4.12e-01 | 87.6% | 88.3% |
| 3387142 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 43.0 | 3.45e-01 | 86.6% | 53.2% |
| 4957722 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.53 | 44.0 | 3.95e-01 | 90.7% | 83.3% |
| 3652462 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.53 | 46.0 | 3.32e-01 | 96.9% | 94.7% |
| 3927639 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.53 | 44.0 | 3.04e-01 | 93.8% | 75.4% |
| 3168452 | 331.10.2.3 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › Med1 | 0.53 | 41.0 | 4.04e-01 | 83.5% | 83.8% |
| 3597339 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.52 | 47.0 | 3.42e-01 | 97.9% | 78.1% |
| 3607693 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 45.0 | 3.21e-01 | 95.9% | 83.9% |
| 3436416 | 2484.5.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 | 0.52 | 40.0 | 3.91e-01 | 82.5% | 78.1% |
| 5022885 | 5.1.4.43 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 | 0.52 | 46.0 | 3.00e-01 | 100.0% | 71.9% |
| 3601126 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 43.0 | 2.85e-01 | 93.8% | 85.4% |
| 3916950 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.51 | 46.0 | 3.32e-01 | 100.0% | 51.1% |
| 4939191 | 10.1.1.64 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF2341 | 0.51 | 45.0 | 3.28e-01 | 100.0% | 60.7% |
| 4113246 | 220.1.1.153 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_TRF2_HOY1 | 0.50 | 40.0 | 3.62e-01 | 86.6% | 88.1% |
| 5040649 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.50 | 43.0 | 3.39e-01 | 97.9% | 75.0% |