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IMGVR_UViG_3300026965_000002-3300026965-Ga0207755_10055512
Arc-VirIMGVR_UViG_3300026965_000002-3300026965-Ga0207755_10055512
Identity
- Kingdom:
- archaea
Quality
84.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-85
Domain cluster:
rep: IMGVR_UViG_2904991991_000001-2904991991-2904995970__D21-90
D2
high
residues 103-220
Domain cluster:
rep: IMGVR_UViG_2617271222_000001-2617271222-2619159599__D7-108
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.84 | 53.0 | 6.53e-01 | 93.2% | 100.0% |
| 2fnaA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 48.0 | 5.96e-01 | 71.2% | 95.9% |
| 3cuqB03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.80 | 47.0 | 5.98e-01 | 72.0% | 100.0% |
| 2l02A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 49.0 | 5.81e-01 | 75.4% | 90.2% |
| 2l01A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.79 | 49.0 | 5.89e-01 | 96.6% | 94.8% |
| 2do7A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 51.0 | 6.01e-01 | 72.0% | 96.2% |
| 1ucrB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.78 | 48.0 | 5.97e-01 | 89.0% | 98.7% |
| 3cjnA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.77 | 47.0 | 4.38e-01 | 70.3% | 50.0% |
| 6abqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 50.0 | 5.32e-01 | 70.3% | 74.5% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 50.0 | 5.31e-01 | 70.3% | 75.2% |
| 4esbA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.76 | 50.0 | 5.32e-01 | 70.3% | 76.7% |
| 3bj6B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.74 | 49.0 | 4.41e-01 | 70.3% | 52.3% |
| 2nnnC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 48.0 | 4.65e-01 | 70.3% | 59.8% |
| 4g9yA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 48.0 | 4.60e-01 | 70.3% | 58.1% |
| 1lj9B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.73 | 48.0 | 4.49e-01 | 70.3% | 55.6% |
| 3cuqA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 46.0 | 5.44e-01 | 96.6% | 93.8% |
| 6juvB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.72 | 45.0 | 5.45e-01 | 93.2% | 98.7% |
| 3bpvA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 49.0 | 4.65e-01 | 70.3% | 60.6% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 49.0 | 4.90e-01 | 70.3% | 70.8% |
| 8agaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 46.0 | 4.56e-01 | 71.2% | 61.9% |
| 5e1wA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.71 | 49.0 | 4.25e-01 | 70.3% | 49.4% |
| 4xrfA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 47.0 | 4.36e-01 | 71.2% | 57.0% |
| 1k78B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 49.0 | 5.27e-01 | 74.6% | 100.0% |
| 2xzn800 | 3.30.63.20 | Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › | 0.69 | 40.0 | 4.47e-01 | 72.9% | 73.1% |
| 4em2A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 48.0 | 4.41e-01 | 72.0% | 69.3% |
| 2wa0A01 | 1.10.10.1200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif | 0.68 | 47.0 | 5.05e-01 | 98.3% | 83.2% |
| 1t6sA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 44.0 | 5.08e-01 | 95.8% | 91.9% |
| 1fpqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 46.0 | 4.50e-01 | 71.2% | 67.4% |
| 3zihA00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.54 | 31.0 | 3.61e-01 | 85.6% | 82.3% |
| 3zieD00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.52 | 30.0 | 3.48e-01 | 84.7% | 80.5% |
| 3etvA02 | 1.20.58.2230 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Retrograde transport protein Dsl1, N-terminal domain | 0.51 | 45.0 | 3.65e-01 | 99.2% | 91.3% |
| 2im5A00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.50 | 42.0 | 2.99e-01 | 93.2% | 58.9% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4945998 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.88 | 49.0 | 6.13e-01 | 89.0% | 88.0% |
| 3253833 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 50.0 | 6.44e-01 | 92.4% | 97.1% |
| 3247158 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.87 | 54.0 | 6.75e-01 | 98.3% | 98.7% |
| 5079941 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.86 | 53.0 | 6.59e-01 | 72.0% | 97.3% |
| 4022486 | 101.1.2.374 ↗ | alpha arrays › HTH › HTH › winged helix domain › MCM4_WHD | 0.85 | 57.0 | 6.53e-01 | 71.2% | 90.0% |
| 5042411 | 101.1.2.150 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_45 | 0.83 | 48.0 | 5.65e-01 | 70.3% | 81.2% |
| 5061097 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.80 | 50.0 | 5.82e-01 | 92.4% | 87.1% |
| 4304578 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.79 | 50.0 | 6.14e-01 | 95.8% | 100.0% |
| 4023459 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 51.0 | 6.08e-01 | 93.2% | 97.5% |
| 5048525 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 51.0 | 5.90e-01 | 94.9% | 91.8% |
| 4993352 | 101.1.2.135 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2 | 0.78 | 46.0 | 5.53e-01 | 90.7% | 87.5% |
| 3284140 | 101.1.2.87 ↗ | alpha arrays › HTH › HTH › winged helix domain › PaaX | 0.77 | 51.0 | 5.64e-01 | 71.2% | 83.2% |
| 167429 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.77 | 47.0 | 4.38e-01 | 70.3% | 50.0% |
| 5073662 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.77 | 70.0 | 5.62e-01 | 96.6% | 95.8% |
| 3930245 | 101.1.2.407 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 | 0.76 | 52.0 | 5.42e-01 | 70.3% | 74.5% |
| 5010374 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 57.0 | 6.30e-01 | 92.4% | 96.8% |
| 3466949 | 101.1.2.524 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7625 | 0.76 | 53.0 | 5.37e-01 | 79.7% | 72.2% |
| 5003128 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 55.0 | 5.89e-01 | 100.0% | 87.0% |
| 3493123 | 101.1.1.321 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PheRS_DBD3 | 0.76 | 45.0 | 4.80e-01 | 72.0% | 66.7% |
| 3441807 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.76 | 51.0 | 5.93e-01 | 71.2% | 95.3% |
| 4986010 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 54.0 | 4.41e-01 | 75.4% | 72.2% |
| 5045522 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 67.0 | 5.16e-01 | 96.6% | 95.9% |
| 3208249 | 101.1.2.311 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA12 | 0.73 | 47.0 | 5.11e-01 | 74.6% | 77.0% |
| 4995085 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 48.0 | 5.31e-01 | 71.2% | 83.2% |
| 3782906 | 101.1.2.311 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA12 | 0.71 | 46.0 | 4.74e-01 | 72.0% | 69.1% |
| 5047068 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.71 | 57.0 | 4.82e-01 | 84.7% | 88.4% |
| 3722124 | 101.1.2.165 ↗ | alpha arrays › HTH › HTH › winged helix domain › ORC_WH_C | 0.70 | 50.0 | 4.85e-01 | 73.7% | 86.4% |
| 3583168 | 101.1.2.490 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_CHMP7 | 0.69 | 53.0 | 5.54e-01 | 84.7% | 85.5% |
| 3743466 | 101.1.2.267 ↗ | alpha arrays › HTH › HTH › winged helix domain › Nse4_C | 0.69 | 43.0 | 4.58e-01 | 92.4% | 70.5% |
| 4974545 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.68 | 43.0 | 4.50e-01 | 72.9% | 68.2% |
| 3666427 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.67 | 50.0 | 4.56e-01 | 78.0% | 92.3% |
| 4935553 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.67 | 48.0 | 4.29e-01 | 73.7% | 95.0% |
| 4638470 | 101.1.2.311 ↗ | alpha arrays › HTH › HTH › winged helix domain › RNA12 | 0.65 | 46.0 | 4.10e-01 | 74.6% | 50.6% |
| 135163 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.64 | 56.0 | 5.37e-01 | 91.5% | 84.2% |
| 4973726 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.64 | 49.0 | 5.00e-01 | 79.7% | 92.2% |
| 1935905 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.63 | 54.0 | 5.13e-01 | 90.7% | 81.8% |
| 5020512 | 101.1.2.14 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_5 | 0.63 | 47.0 | 3.74e-01 | 77.1% | 48.4% |
| 3279756 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.63 | 56.0 | 5.32e-01 | 96.6% | 82.9% |
| 4127805 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.61 | 55.0 | 5.08e-01 | 96.6% | 76.0% |
| 2325472 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.61 | 54.0 | 5.20e-01 | 96.6% | 84.1% |
| 4990919 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.61 | 43.0 | 4.56e-01 | 72.9% | 85.0% |
| 4963345 | 101.1.2.928 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Cmi2_C | 0.57 | 48.0 | 4.38e-01 | 89.0% | 95.5% |
| 3210565 | 101.1.2.267 ↗ | alpha arrays › HTH › HTH › winged helix domain › Nse4_C | 0.56 | 49.0 | 4.55e-01 | 93.2% | 75.9% |
| 3516017 | 109.4.1.630 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CNOT1_TTP_bind,CNOT1_HEAT | 0.55 | 49.0 | 3.33e-01 | 100.0% | 28.3% |
| 3279331 | 101.1.2.612 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR_2, PF27059 | 0.54 | 49.0 | 4.42e-01 | 94.9% | 87.0% |