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IMGVR_UViG_3300026985_000010-3300026985-Ga0207851_1014345
Arc-VirIMGVR_UViG_3300026985_000010-3300026985-Ga0207851_1014345
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-136
Domain cluster:
rep: IMGVR_UViG_2554235495_000005-2554235495-2556168291__D10-154
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w7vA00 | 3.30.1360.100 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM | 0.65 | 35.0 | 4.32e-01 | 99.3% | 84.1% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.65 | 44.0 | 4.60e-01 | 91.9% | 75.8% |
| 3h7tA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.63 | 39.0 | 4.21e-01 | 89.6% | 73.9% |
| 2w5eA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.63 | 34.0 | 4.33e-01 | 100.0% | 94.6% |
| 1a7sA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 37.0 | 4.17e-01 | 89.6% | 78.1% |
| 5hmaA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 35.0 | 4.17e-01 | 87.4% | 86.2% |
| 3f7eA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 45.0 | 4.60e-01 | 91.9% | 88.3% |
| 5c94A00 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.56 | 34.0 | 3.61e-01 | 87.4% | 68.1% |
| 1p38A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 34.0 | 3.40e-01 | 88.9% | 56.7% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 29.0 | 3.54e-01 | 82.2% | 80.8% |
| 4evuB00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.56 | 29.0 | 3.89e-01 | 83.7% | 98.5% |
| 1y12B00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.55 | 51.0 | 4.84e-01 | 100.0% | 98.1% |
| 3bpkA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 47.0 | 4.27e-01 | 91.9% | 75.4% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.55 | 34.0 | 4.14e-01 | 88.1% | 100.0% |
| 2zfuA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 33.0 | 3.19e-01 | 95.6% | 49.1% |
| 3kvqA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 27.0 | 3.39e-01 | 82.2% | 76.8% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.54 | 36.0 | 3.98e-01 | 90.4% | 87.5% |
| 1qz8A01 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.53 | 33.0 | 3.62e-01 | 87.4% | 77.1% |
| 1lp9E02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 28.0 | 3.50e-01 | 86.7% | 86.3% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 44.0 | 4.31e-01 | 92.6% | 83.0% |
| 2zzeA04 | 3.30.980.10 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Threonyl-trna Synthetase; Chain A, domain 2 | 0.52 | 31.0 | 3.53e-01 | 100.0% | 81.1% |
| 5t89X05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 34.0 | 3.72e-01 | 83.0% | 81.8% |
| 5wy8B03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 3.74e-01 | 83.0% | 83.0% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3972305 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 46.0 | 5.53e-01 | 86.7% | 97.8% |
| 3966429 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.72 | 46.0 | 5.52e-01 | 86.7% | 97.8% |
| 4393593 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.71 | 47.0 | 5.53e-01 | 100.0% | 96.8% |
| 3967435 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.69 | 46.0 | 5.35e-01 | 87.4% | 95.8% |
| 3966280 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 46.0 | 5.34e-01 | 87.4% | 95.8% |
| 4319057 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.68 | 45.0 | 4.86e-01 | 90.4% | 79.1% |
| 3943282 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.67 | 46.0 | 4.84e-01 | 89.6% | 78.3% |
| 4551243 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.67 | 45.0 | 4.64e-01 | 91.9% | 72.8% |
| 2407461 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.66 | 45.0 | 4.57e-01 | 91.9% | 71.0% |
| 3265698 | 1.1.13.66 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dicty_CAD | 0.65 | 45.0 | 5.16e-01 | 90.4% | 98.9% |
| 5038876 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.64 | 42.0 | 5.02e-01 | 86.7% | 98.9% |
| 4565791 | 1.1.7.87 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25954 | 0.63 | 36.0 | 4.26e-01 | 83.7% | 82.2% |
| 3164699 | 1.1.13.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N | 0.62 | 50.0 | 5.38e-01 | 100.0% | 98.3% |
| 3995394 | 11.1.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Filamin | 0.61 | 38.0 | 4.33e-01 | 87.4% | 83.0% |
| 3995934 | 389.4.1.0 ↗ | few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain | 0.61 | 31.0 | 3.82e-01 | 100.0% | 77.6% |
| 5002750 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.60 | 44.0 | 4.91e-01 | 86.7% | 97.1% |
| 5082881 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.60 | 51.0 | 5.28e-01 | 91.1% | 99.2% |
| 4157825 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.60 | 51.0 | 5.22e-01 | 91.9% | 96.9% |
| 3622133 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.59 | 45.0 | 3.68e-01 | 96.3% | 43.2% |
| 4982153 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.59 | 50.0 | 3.97e-01 | 91.1% | 49.3% |
| 4273561 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.58 | 39.0 | 3.96e-01 | 85.2% | 67.4% |
| 4214302 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.58 | 45.0 | 3.86e-01 | 94.1% | 50.5% |
| 3546177 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.58 | 37.0 | 3.13e-01 | 89.6% | 37.0% |
| 3990261 | 389.4.1.7 ↗ | few secondary structure elements › EGF-like › Fibulin-4 EGF-like 1 domain › Fibulin-4 EGF-like 1 domain › TIL_2 | 0.57 | 26.0 | 3.49e-01 | 83.7% | 84.6% |
| 3696371 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.57 | 49.0 | 4.08e-01 | 91.9% | 62.7% |
| 2101633 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.57 | 52.0 | 4.85e-01 | 100.0% | 85.0% |
| 3942090 | 1.1.5.77 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube | 0.56 | 51.0 | 4.82e-01 | 100.0% | 87.9% |
| 3369437 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.56 | 44.0 | 3.61e-01 | 96.3% | 44.8% |
| 3976188 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.55 | 51.0 | 4.75e-01 | 100.0% | 86.7% |
| 4096792 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.55 | 47.0 | 4.10e-01 | 91.9% | 68.3% |
| 4441129 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.55 | 39.0 | 4.16e-01 | 90.4% | 83.3% |
| 4062509 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.55 | 38.0 | 4.24e-01 | 89.6% | 92.4% |
| 3909822 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.55 | 42.0 | 4.65e-01 | 90.4% | 100.0% |
| 3602499 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.54 | 45.0 | 4.59e-01 | 91.9% | 91.5% |
| 3245368 | 304.44.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S10 › Ribosomal protein S10 › Ribosomal_S10 | 0.54 | 30.0 | 3.46e-01 | 77.8% | 74.7% |
| 4663234 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 36.0 | 4.19e-01 | 90.4% | 100.0% |
| 4667615 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.53 | 34.0 | 3.59e-01 | 94.8% | 70.4% |
| 3535347 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.53 | 42.0 | 4.54e-01 | 91.9% | 100.0% |
| 5067070 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.52 | 44.0 | 4.43e-01 | 91.9% | 90.0% |
| 4118093 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.52 | 44.0 | 4.24e-01 | 91.9% | 79.4% |
| 5053266 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.52 | 44.0 | 4.20e-01 | 91.9% | 90.0% |
| 4988254 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.52 | 44.0 | 4.00e-01 | 91.9% | 71.7% |
| 4968263 | 1.1.5.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_C | 0.51 | 44.0 | 3.71e-01 | 91.9% | 63.6% |
| 3988859 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.51 | 33.0 | 3.73e-01 | 80.0% | 84.8% |
| 4992907 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.51 | 44.0 | 4.19e-01 | 91.9% | 81.9% |
| 4564083 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.50 | 38.0 | 3.24e-01 | 96.3% | 46.3% |