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IMGVR_UViG_3300026985_000012-3300026985-Ga0207851_10000432

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300026985_000012-3300026985-Ga0207851_10000432 ↗
Kingdom:: archaea

Quality

79.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 78-127

PDB

Domain cluster: representative

CATH (12)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1wjtA00	1.20.930.10	Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70	0.69	58.0	4.71e-01	100.0%	57.3%
2q09A02	3.20.20.140	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases	0.66	56.0	3.50e-01	100.0%	31.4%
3ddmA01	3.30.390.10	Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain	0.65	48.0	3.59e-01	80.0%	46.4%
2iz1A02	1.10.1040.10	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	0.62	45.0	2.93e-01	82.0%	22.7%
5ffdA00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.61	53.0	3.88e-01	100.0%	88.3%
2kvsA00	1.10.150.260	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › YozE SAM-like	0.60	45.0	3.93e-01	84.0%	65.0%
4mdvB03	1.10.220.10	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin	0.59	50.0	4.21e-01	100.0%	72.5%
3qsgA02	1.10.1040.10	Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2	0.57	42.0	3.46e-01	90.0%	100.0%
3busB00	3.40.50.150	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39	0.57	45.0	2.99e-01	96.0%	57.0%
1z6oM00	1.20.1260.10	Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle	0.56	48.0	3.26e-01	100.0%	71.2%
6he1B01	1.10.287.40	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain	0.55	37.0	3.47e-01	78.0%	54.7%
3no6A00	1.20.910.10	Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like	0.54	44.0	2.95e-01	100.0%	65.1%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3783415	109.4.1.59 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF383,DUF384	0.76	68.0	4.05e-01	100.0%	24.9%
4580956	2484.1.1.222 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UPF0236	0.69	51.0	3.25e-01	80.0%	21.7%
3430906	130.1.1.0 ↗	alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif	0.68	58.0	4.87e-01	100.0%	98.9%
4124807	101.11.1.0 ↗	alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3	0.60	45.0	3.82e-01	84.0%	85.6%
4938082	7516.1.1.26 ↗	a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_tranf_2_3	0.57	46.0	2.79e-01	96.0%	86.3%
3361136	2003.1.5.30 ↗	a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7	0.53	43.0	2.80e-01	98.0%	35.8%
3362049	2007.1.2.4 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor	0.53	42.0	2.93e-01	100.0%	67.1%