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IMGVR_UViG_3300026985_000012-3300026985-Ga0207851_10000474

Arc-Vir

IMGVR_UViG_3300026985_000012-3300026985-Ga0207851_10000474

Identity

Kingdom:
archaea

Quality

91.5 mean pLDDT

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-108
PDB
Domain cluster: rep: IMGVR_UViG_3300018069_000019-3300018069-Ga0192660_1111262__D10-107
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF26442.2 best Halo_toxin 40.0 5.70e-10 67.3% 98.5%
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tfkA00 3.10.450.200 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.63 51.0 5.30e-01 87.1% 97.9%
1v5uA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 43.0 4.09e-01 70.3% 89.7%
1x05A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 44.0 4.11e-01 78.2% 84.5%
3h3lC00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.59 41.0 3.20e-01 71.3% 90.1%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 40.0 3.78e-01 71.3% 79.0%
2gcjA01 2.30.29.150 Mainly Beta › Roll › PH-domain like › 0.58 40.0 3.71e-01 72.3% 99.3%
1fwxA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 50.0 3.23e-01 100.0% 44.3%
1wgqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 38.0 3.74e-01 70.3% 89.0%
1u5dA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 39.0 3.84e-01 73.3% 97.2%
1j0wB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 37.0 3.74e-01 70.3% 91.3%
5d3xB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 45.0 4.07e-01 92.1% 82.3%
1v61A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 46.0 4.26e-01 94.1% 86.4%
1upqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 43.0 4.23e-01 86.1% 100.0%
2kuqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 37.0 3.28e-01 73.3% 87.6%
1cjaA01 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.51 39.0 3.47e-01 82.2% 78.7%
7k0aA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.51 44.0 3.60e-01 96.0% 85.6%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4460363 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.62 46.0 4.48e-01 80.2% 84.3%
3482603 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 42.0 4.22e-01 74.3% 100.0%
3566291 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.58 42.0 3.79e-01 74.3% 90.4%
3472609 220.1.1.35 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IQ_SEC7_PH 0.57 49.0 4.21e-01 95.0% 88.5%
3503446 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.57 39.0 3.27e-01 70.3% 69.7%
3589250 234.3.1.3 ↗ a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain › PBECR4 0.56 46.0 3.84e-01 88.1% 64.0%
3292855 220.1.1.36 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.55 37.0 3.52e-01 70.3% 83.2%
184723 4294.1.1.2 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Trm112p 0.54 39.0 4.15e-01 76.2% 89.9%
3479575 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.54 41.0 3.68e-01 81.2% 91.7%
3479736 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 39.0 3.89e-01 77.2% 89.9%
3876167 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 42.0 3.60e-01 88.1% 71.4%
3634755 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.53 39.0 3.65e-01 78.2% 83.2%
4142302 5.1.4.16 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.52 39.0 2.70e-01 78.2% 37.0%
3882494 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 37.0 3.57e-01 73.3% 87.8%
3997284 6043.1.1.4 ↗ a+b two layers › yfeY-like › yfeY-like › yfeY-like › PHAF1 0.52 32.0 3.72e-01 89.1% 96.8%
3598462 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 36.0 3.38e-01 73.3% 84.0%
3198727 220.1.1.121 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SLA1 0.51 37.0 3.56e-01 77.2% 80.0%
3785928 220.1.1.245 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF29445 0.51 43.0 3.63e-01 93.1% 58.2%
3481724 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 38.0 3.73e-01 80.2% 99.1%