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IMGVR_UViG_3300026991_000009-3300026991-Ga0207772_10008013
Arc-VirIMGVR_UViG_3300026991_000009-3300026991-Ga0207772_10008013
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-54
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18780.7 best | HNH_repeat | 40.5 | 3.80e-10 | 100.0% | 90.7% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3frqB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.75 | 65.0 | 4.44e-01 | 100.0% | 27.2% |
| 4aciA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.75 | 65.0 | 4.48e-01 | 100.0% | 28.4% |
| 2yveB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.75 | 65.0 | 4.49e-01 | 100.0% | 29.1% |
| 3aqtA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.72 | 62.0 | 4.20e-01 | 100.0% | 25.6% |
| 4jykA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.71 | 60.0 | 5.84e-01 | 100.0% | 86.2% |
| 2hkuB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.71 | 60.0 | 4.12e-01 | 100.0% | 26.5% |
| 3f1bA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.70 | 59.0 | 4.07e-01 | 100.0% | 27.3% |
| 3c2bA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 58.0 | 5.75e-01 | 98.0% | 94.2% |
| 3s5rB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.69 | 58.0 | 3.98e-01 | 100.0% | 25.5% |
| 2hxoA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.69 | 60.0 | 5.58e-01 | 100.0% | 79.4% |
| 6ko8A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.69 | 56.0 | 3.90e-01 | 100.0% | 26.5% |
| 2fbqA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 58.0 | 3.87e-01 | 100.0% | 23.5% |
| 2q24A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.67 | 54.0 | 3.87e-01 | 100.0% | 28.3% |
| 3dewA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.66 | 55.0 | 5.54e-01 | 100.0% | 96.2% |
| 3pvlA03 | 1.20.80.10 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.66 | 55.0 | 4.29e-01 | 100.0% | 48.3% |
| 2hxiA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 53.0 | 4.98e-01 | 100.0% | 78.1% |
| 6el2B01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.64 | 50.0 | 5.07e-01 | 96.0% | 95.9% |
| 3ugjA02 | 1.10.8.750 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Phosphoribosylformylglycinamidine synthase, linker domain | 0.58 | 36.0 | 3.42e-01 | 76.0% | 51.6% |
| 2qr6A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 43.0 | 2.64e-01 | 98.0% | 36.9% |
ECOD (72)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4938132 | 101.1.1.551 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HNH_repeat | 0.94 | 86.0 | 8.65e-01 | 98.0% | 100.0% |
| 5081163 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 82.0 | 7.91e-01 | 100.0% | 90.9% |
| 4932174 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 66.0 | 6.42e-01 | 100.0% | 81.8% |
| 3279079 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.78 | 67.0 | 5.78e-01 | 100.0% | 61.3% |
| 3288755 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.75 | 66.0 | 6.07e-01 | 100.0% | 78.5% |
| 134145 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.75 | 65.0 | 5.87e-01 | 100.0% | 71.4% |
| 4949917 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.75 | 66.0 | 5.77e-01 | 100.0% | 66.7% |
| 3279034 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.75 | 65.0 | 5.60e-01 | 100.0% | 62.5% |
| 3963033 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.75 | 64.0 | 5.92e-01 | 100.0% | 76.9% |
| 3980588 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.74 | 64.0 | 5.53e-01 | 100.0% | 62.5% |
| 3285817 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.74 | 64.0 | 5.67e-01 | 100.0% | 66.7% |
| 3284307 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.73 | 62.0 | 6.24e-01 | 96.0% | 96.0% |
| 386667 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.73 | 63.0 | 5.37e-01 | 100.0% | 59.5% |
| 3290883 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.73 | 63.0 | 5.56e-01 | 100.0% | 66.7% |
| 165241 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 63.0 | 5.41e-01 | 100.0% | 61.0% |
| 364355 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.72 | 62.0 | 5.37e-01 | 100.0% | 61.7% |
| 1692421 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.72 | 61.0 | 5.37e-01 | 100.0% | 63.3% |
| 3960353 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 62.0 | 5.75e-01 | 100.0% | 78.5% |
| 3287176 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.72 | 62.0 | 5.74e-01 | 100.0% | 78.5% |
| 3962541 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.72 | 62.0 | 5.47e-01 | 100.0% | 66.7% |
| 3960205 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.72 | 62.0 | 5.38e-01 | 100.0% | 62.5% |
| 3953810 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.72 | 61.0 | 5.44e-01 | 100.0% | 66.7% |
| 5042936 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.72 | 62.0 | 5.77e-01 | 100.0% | 98.5% |
| 146663 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.72 | 61.0 | 5.36e-01 | 100.0% | 64.1% |
| 4187216 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 61.0 | 5.41e-01 | 100.0% | 66.7% |
| 4883280 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 59.0 | 5.35e-01 | 100.0% | 67.1% |
| 3969490 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.71 | 61.0 | 5.51e-01 | 100.0% | 71.4% |
| 3288981 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 61.0 | 5.20e-01 | 100.0% | 58.8% |
| 2842310 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 60.0 | 5.28e-01 | 100.0% | 64.1% |
| 3278910 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 60.0 | 5.16e-01 | 100.0% | 58.8% |
| 369565 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 60.0 | 5.32e-01 | 100.0% | 64.9% |
| 3106098 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 60.0 | 5.36e-01 | 100.0% | 67.6% |
| 3951353 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.71 | 61.0 | 5.26e-01 | 100.0% | 62.5% |
| 2541 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 61.0 | 5.40e-01 | 100.0% | 67.6% |
| 1723971 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 60.0 | 5.41e-01 | 100.0% | 69.4% |
| 2521 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 58.0 | 4.96e-01 | 100.0% | 55.7% |
| 3287545 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 61.0 | 5.26e-01 | 100.0% | 62.5% |
| 2524 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 60.0 | 5.42e-01 | 100.0% | 70.4% |
| 339417 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 60.0 | 5.35e-01 | 100.0% | 67.6% |
| 1934751 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 59.0 | 5.32e-01 | 100.0% | 67.6% |
| 3282537 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 59.0 | 5.64e-01 | 100.0% | 83.3% |
| 4237737 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 60.0 | 5.42e-01 | 100.0% | 71.4% |
| 4977986 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 61.0 | 5.61e-01 | 100.0% | 76.9% |
| 3970046 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 59.0 | 5.51e-01 | 100.0% | 76.9% |
| 1667116 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 58.0 | 5.17e-01 | 100.0% | 64.1% |
| 140289 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.70 | 59.0 | 5.36e-01 | 100.0% | 71.4% |
| 2141310 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 59.0 | 5.28e-01 | 100.0% | 68.5% |
| 3962482 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 59.0 | 5.51e-01 | 100.0% | 76.9% |
| 4057463 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 59.0 | 5.06e-01 | 100.0% | 58.8% |
| 143568 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 58.0 | 5.34e-01 | 100.0% | 72.5% |
| 3286145 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 55.0 | 4.98e-01 | 100.0% | 64.0% |
| 1349563 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 59.0 | 5.09e-01 | 100.0% | 61.0% |
| 3950019 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 58.0 | 5.07e-01 | 100.0% | 62.5% |
| 3942219 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 57.0 | 5.15e-01 | 100.0% | 66.7% |
| 2537 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 57.0 | 5.32e-01 | 100.0% | 73.5% |
| 1212365 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 57.0 | 5.39e-01 | 100.0% | 78.1% |
| 4957942 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 58.0 | 5.30e-01 | 100.0% | 71.4% |
| 2515 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.69 | 57.0 | 5.24e-01 | 100.0% | 70.4% |
| 383546 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 57.0 | 5.49e-01 | 100.0% | 84.7% |
| 3966733 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 56.0 | 5.65e-01 | 94.0% | 94.0% |
| 4980763 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 57.0 | 5.21e-01 | 100.0% | 71.4% |
| 1159838 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 57.0 | 5.26e-01 | 100.0% | 73.5% |
| 2462393 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 56.0 | 5.02e-01 | 100.0% | 64.9% |
| 3943822 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.68 | 57.0 | 5.10e-01 | 100.0% | 66.7% |
| 3570216 | 197.1.1.1 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M | 0.68 | 57.0 | 4.42e-01 | 100.0% | 47.5% |
| 3291657 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 56.0 | 5.16e-01 | 100.0% | 71.4% |
| 3286480 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.68 | 56.0 | 5.47e-01 | 98.0% | 89.1% |
| 2520 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.67 | 56.0 | 5.14e-01 | 100.0% | 70.4% |
| 3995159 | 197.1.1.1 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M | 0.67 | 57.0 | 4.44e-01 | 100.0% | 52.2% |
| 1171113 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.67 | 54.0 | 5.05e-01 | 100.0% | 72.1% |
| 3533409 | 197.1.1.0 ↗ | alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like | 0.67 | 58.0 | 4.49e-01 | 100.0% | 49.6% |
| 4654599 | 101.1.1.5 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › TetR_N | 0.66 | 51.0 | 5.19e-01 | 94.0% | 94.0% |
D2
high
residues 74-154
Domain cluster:
rep: OP056089.1__UYD72102.1__X__00002__D5-102
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13392.13 best | HNH_3 | 37.2 | 2.40e-09 | 58.0% | 95.7% |