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IMGVR_UViG_3300026991_000009-3300026991-Ga0207772_10008015

Arc-Vir

IMGVR_UViG_3300026991_000009-3300026991-Ga0207772_10008015

Identity

Kingdom:
archaea

Quality

86.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 37-98
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3terA00 1.10.287.3550 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.66 58.0 4.61e-01 96.8% 63.0%
6cgaC02 1.20.58.860 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 50.0 4.66e-01 91.9% 87.2%
3mdmA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.59 53.0 3.19e-01 100.0% 17.0%
4i5sA01 1.10.8.500 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › HAMP domain in histidine kinase 0.59 43.0 4.30e-01 88.7% 75.4%
3rklA00 6.10.140.1640 Special › Helix non-globular › Helix Hairpins › 0.58 44.0 4.09e-01 83.9% 72.5%
2bskE00 1.10.287.810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains 0.58 47.0 4.70e-01 93.5% 85.7%
2bskB00 1.10.287.810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains 0.58 46.0 4.52e-01 87.1% 81.5%
8e83B01 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.58 50.0 3.02e-01 100.0% 16.4%
2a7oA00 1.10.1740.100 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Set2, Rpb1 interacting domain 0.57 45.0 3.84e-01 100.0% 52.0%
3whjA00 6.10.140.1710 Special › Helix non-globular › Helix Hairpins › 0.57 48.0 4.01e-01 95.2% 55.9%
4ed9A01 3.40.50.10540 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Crotonobetainyl-coa:carnitine coa-transferase; domain 1 0.54 46.0 3.04e-01 98.4% 25.9%
3s3lA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.52 46.0 3.42e-01 100.0% 93.7%
2a3qA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.52 46.0 3.72e-01 96.8% 83.2%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4123079 4168.1.1.0 ↗ alpha duplicates or obligate multimers › HAMP domain › HAMP domain › HAMP domain 0.83 40.0 4.33e-01 91.9% 54.5%
3192001 633.23.1.22 ↗ alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL 0.64 57.0 4.35e-01 100.0% 45.7%
3738472 4177.1.1.9 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Snx8_BAR_dom 0.63 54.0 3.57e-01 93.5% 36.2%
3798300 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.62 50.0 3.95e-01 87.1% 99.2%
3589888 4275.1.1.0 ↗ alpha arrays › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like › Hypothetical protein YqbG-like 0.61 42.0 3.69e-01 98.4% 48.9%
3797019 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.61 51.0 3.26e-01 93.5% 24.0%
4002712 5057.1.1.0 ↗ alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore 0.59 49.0 3.66e-01 93.5% 36.9%
3710128 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.59 48.0 3.23e-01 93.5% 23.6%
3176858 174.1.1.0 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.59 52.0 4.02e-01 100.0% 48.6%
3739377 4177.1.1.1 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.58 47.0 3.07e-01 93.5% 20.0%
3405078 3226.1.1.2 ↗ alpha complex topology › Uracil Transporter UraA › Uracil Transporter UraA › Uracil Transporter UraA › Sulfate_transp 0.58 50.0 3.07e-01 100.0% 15.5%
3233827 5057.1.1.0 ↗ alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore 0.57 51.0 4.10e-01 100.0% 86.7%
3349750 3567.1.1.75 ↗ a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › PTPLA 0.57 46.0 3.27e-01 93.5% 50.5%
3987595 5042.1.1.1 ↗ extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA 0.57 43.0 4.34e-01 95.2% 81.2%
4178971 148.1.1.1 ↗ alpha arrays › Histone-like › Histone-related › Histone › Histone 0.56 46.0 3.64e-01 87.1% 50.8%
3440194 601.3.1.4 ↗ alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › PTPLA 0.56 46.0 3.27e-01 95.2% 57.7%
3175761 5069.1.1.4 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Ferric_reduct 0.56 47.0 3.27e-01 100.0% 33.0%
4176828 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.54 38.0 3.63e-01 72.6% 71.4%
3731535 150.1.1.0 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin 0.54 41.0 3.60e-01 100.0% 53.0%