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IMGVR_UViG_3300027323_000053-3300027323-Ga0209426_100173710

Arc-Vir

IMGVR_UViG_3300027323_000053-3300027323-Ga0209426_100173710

Quality

87.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-77
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05016.22 best ParE_toxin 41.8 1.90e-10 98.7% 92.1%
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5cegD00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.91 86.0 7.56e-01 100.0% 90.1%
1wmiA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.90 85.0 7.91e-01 100.0% 92.0%
3g5oC00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.89 83.0 7.82e-01 100.0% 88.5%
2kheA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.88 81.0 7.62e-01 100.0% 89.9%
3kxeA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.88 82.0 7.46e-01 100.0% 89.4%
3bpqD00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.86 78.0 7.45e-01 98.6% 89.5%
5cw7B00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.86 80.0 7.32e-01 100.0% 89.4%
7bwfA00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.86 78.0 7.41e-01 100.0% 94.3%
4ml0B00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.85 78.0 7.28e-01 100.0% 91.1%
4mcxF00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.79 71.0 6.64e-01 100.0% 98.9%
3lp9A00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.70 48.0 3.34e-01 100.0% 22.9%
1itvA00 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.68 43.0 3.14e-01 100.0% 24.1%
2htaA00 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.68 42.0 2.77e-01 98.6% 15.2%
1ifqB00 3.30.450.50 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain 0.68 57.0 4.73e-01 100.0% 53.1%
1khiA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 39.0 3.97e-01 100.0% 59.7%
2g8sB00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.66 46.0 2.93e-01 73.0% 29.7%
3u4yA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 45.0 2.88e-01 70.3% 21.3%
4xpmB00 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.65 48.0 4.98e-01 100.0% 86.6%
3sojB00 3.30.700.10 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin 0.63 47.0 4.13e-01 81.1% 80.9%
2vrwB02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 47.0 4.02e-01 100.0% 49.6%
2b5lB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.62 43.0 2.72e-01 73.0% 16.8%
7b9cA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 42.0 2.64e-01 71.6% 17.6%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 45.0 2.87e-01 78.4% 28.5%
4hz9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 52.0 4.39e-01 100.0% 69.9%
2v7sA00 3.30.2030.20 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.57 42.0 3.33e-01 79.7% 76.3%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.56 49.0 3.98e-01 97.3% 69.3%
6i8xA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 49.0 3.97e-01 100.0% 81.2%
2nn6D00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.55 41.0 2.97e-01 78.4% 97.6%
3i2nA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 47.0 3.02e-01 93.2% 90.1%
2b1xB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 49.0 3.77e-01 100.0% 83.8%
1lfoA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 46.0 3.99e-01 100.0% 85.8%
1m3qA01 3.30.310.40 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.54 41.0 3.87e-01 94.6% 67.4%
7bj4A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 48.0 3.05e-01 100.0% 98.4%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.54 34.0 3.75e-01 98.6% 83.9%
1e8uA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.54 42.0 2.69e-01 89.2% 24.4%
3krnA00 3.30.230.70 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain 0.53 42.0 3.18e-01 86.5% 95.6%
2bolB02 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 44.0 3.67e-01 91.9% 75.8%
1y4oA00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.52 42.0 3.83e-01 97.3% 66.3%
4l8oA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 46.0 3.56e-01 100.0% 70.7%
2jq5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 45.0 3.78e-01 100.0% 80.5%
3imoC00 3.30.920.70 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › 0.51 37.0 3.33e-01 78.4% 67.3%
ECOD (83)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4967722 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.98 93.0 9.00e-01 98.6% 93.8%
5014619 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.97 93.0 9.06e-01 100.0% 93.8%
5071213 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.96 92.0 8.95e-01 100.0% 95.0%
5080208 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.95 91.0 8.41e-01 100.0% 87.8%
5018712 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.95 91.0 8.42e-01 100.0% 90.0%
4968316 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.95 90.0 8.40e-01 100.0% 88.6%
5014147 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.95 90.0 8.78e-01 100.0% 96.2%
5063859 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.95 90.0 8.74e-01 100.0% 95.0%
4949569 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.94 90.0 8.28e-01 100.0% 85.6%
5044967 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.94 89.0 8.26e-01 100.0% 88.9%
4966797 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.94 89.0 8.43e-01 100.0% 91.8%
5007067 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.94 89.0 8.22e-01 100.0% 93.3%
5031617 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.94 88.0 8.51e-01 98.6% 97.5%
5080337 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.94 89.0 8.27e-01 100.0% 86.5%
5030204 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.93 87.0 8.66e-01 98.6% 96.0%
4940748 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.93 86.0 8.21e-01 100.0% 86.7%
4938029 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.93 88.0 7.86e-01 100.0% 84.7%
4933908 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.93 88.0 8.31e-01 100.0% 94.1%
4937857 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.93 88.0 8.59e-01 100.0% 92.5%
4966983 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.93 87.0 8.49e-01 100.0% 97.5%
4994192 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.92 88.0 8.57e-01 100.0% 95.0%
4937462 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.92 88.0 7.96e-01 100.0% 89.5%
4928181 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.92 87.0 8.24e-01 100.0% 87.1%
4937366 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.92 87.0 7.83e-01 100.0% 83.2%
4937019 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.91 86.0 7.99e-01 100.0% 91.1%
3602698 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.91 85.0 8.06e-01 100.0% 92.9%
4941220 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.91 86.0 8.32e-01 100.0% 92.5%
5027803 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.90 85.0 8.29e-01 100.0% 92.5%
4585524 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.90 85.0 7.91e-01 100.0% 94.4%
5018720 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.90 85.0 8.07e-01 100.0% 91.8%
4959351 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.90 83.0 8.08e-01 100.0% 90.0%
5075086 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.89 84.0 8.16e-01 100.0% 92.5%
4984297 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.89 84.0 7.77e-01 100.0% 86.7%
5080427 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.89 84.0 8.14e-01 100.0% 92.5%
3986903 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.89 83.0 7.84e-01 98.6% 98.8%
4968774 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.89 83.0 8.31e-01 98.6% 98.7%
5065653 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.89 84.0 7.28e-01 100.0% 93.3%
4646165 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.89 84.0 7.76e-01 100.0% 92.2%
3166135 4312.1.1.4 a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.89 83.0 7.56e-01 100.0% 80.0%
3945861 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.88 84.0 7.73e-01 100.0% 86.7%
4463632 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.88 84.0 7.74e-01 100.0% 94.4%
2966315 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.88 82.0 7.48e-01 100.0% 89.5%
4544637 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.88 83.0 7.60e-01 100.0% 91.4%
5056462 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.88 82.0 7.62e-01 100.0% 87.8%
138730 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.88 81.0 7.62e-01 100.0% 89.9%
4937762 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.88 82.0 7.59e-01 100.0% 90.0%
4887373 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.88 81.0 7.97e-01 100.0% 97.5%
5052823 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.87 81.0 7.40e-01 100.0% 91.6%
5037323 4312.1.1.11 a+b two layers › RelE-like › RelE-like › RelE-like › ParE-like_toxin 0.87 73.0 7.16e-01 89.2% 82.5%
5029202 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.87 80.0 7.64e-01 100.0% 85.9%
169853 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.87 78.0 7.49e-01 98.6% 89.4%
2770566 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.86 80.0 7.38e-01 100.0% 93.5%
3982278 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.84 75.0 6.94e-01 94.6% 88.9%
4966645 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.83 68.0 7.06e-01 100.0% 94.2%
5007064 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.82 75.0 7.47e-01 100.0% 97.3%
5028231 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.81 74.0 6.39e-01 100.0% 77.0%
5061645 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.80 63.0 6.75e-01 98.6% 98.4%
3964028 4312.2.1.1 a+b two layers › RelE-like › YaeB-like › YaeB-like › TrmO_C 0.78 65.0 6.51e-01 100.0% 88.0%
4968449 4312.1.1.15 a+b two layers › RelE-like › RelE-like › RelE-like › DUF4258 0.77 62.0 6.54e-01 98.6% 98.5%
3526903 4312.2.1.0 a+b two layers › RelE-like › YaeB-like › YaeB-like 0.76 71.0 6.35e-01 100.0% 85.9%
5061910 4312.1.1.3 a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin 0.76 67.0 6.69e-01 97.3% 96.0%
3276550 4312.2.1.0 a+b two layers › RelE-like › YaeB-like › YaeB-like 0.76 70.0 6.45e-01 100.0% 94.6%
3591883 5.1.4.169 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_RSE1_2nd 0.69 46.0 2.98e-01 100.0% 16.2%
5042309 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.68 61.0 5.77e-01 100.0% 82.2%
3742632 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.67 47.0 3.09e-01 73.0% 22.1%
3915831 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 51.0 4.29e-01 100.0% 48.8%
3627627 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.66 50.0 4.01e-01 100.0% 41.4%
2089781 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.66 53.0 5.11e-01 100.0% 77.3%
3740896 5.1.4.16 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A 0.65 45.0 2.90e-01 71.6% 20.3%
3266642 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 47.0 3.70e-01 100.0% 38.1%
3774600 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.62 49.0 3.79e-01 100.0% 38.7%
3477246 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.61 49.0 3.98e-01 100.0% 45.7%
3620870 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.58 47.0 4.36e-01 100.0% 68.0%
3268037 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 49.0 3.86e-01 100.0% 44.5%
3615270 59.1.1.0 beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like 0.56 50.0 4.27e-01 100.0% 87.6%
3275991 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 48.0 3.99e-01 100.0% 53.3%
4941285 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.56 38.0 3.96e-01 98.6% 75.7%
3225640 220.1.1.168 beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 0.55 41.0 3.58e-01 95.9% 48.8%
4946325 223.2.1.0 a+b three layers › Profilin-like › profilin-like › profilin-like 0.53 39.0 3.51e-01 78.4% 61.9%
4031750 274.1.1.25 a+b two layers › Pili subunits › Pili subunits › Pili subunits › ComGF 0.53 40.0 3.70e-01 83.8% 87.9%
3272565 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.52 43.0 2.83e-01 100.0% 26.4%
4026698 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.50 36.0 3.65e-01 75.7% 82.7%
3955307 881.1.1.8 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PknH_C 0.50 43.0 3.37e-01 100.0% 87.9%