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IMGVR_UViG_3300027396_000693-3300027396-Ga0255146_10017933

Arc-Vir

IMGVR_UViG_3300027396_000693-3300027396-Ga0255146_10017933

Quality

93.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-80_135-207
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF05050.20 best Methyltransf_21 41.9 1.70e-10 47.3% 30.1%
D2 high residues 83-130
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1cov100 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 48.0 3.05e-01 100.0% 33.8%
1pzxA02 2.20.28.50 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain 0.54 37.0 4.08e-01 93.8% 100.0%
1j3wC00 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.51 37.0 2.84e-01 83.3% 99.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3732370 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.52 45.0 4.21e-01 100.0% 93.3%
3249243 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 41.0 3.25e-01 97.9% 64.4%
3274364 560.1.1.0 few secondary structure elements › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain 0.50 41.0 4.09e-01 93.8% 93.9%
4095963 192.8.1.446 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › SKICH 0.50 41.0 2.66e-01 100.0% 22.1%