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IMGVR_UViG_3300027396_000693-3300027396-Ga0255146_10017933
Arc-VirIMGVR_UViG_3300027396_000693-3300027396-Ga0255146_10017933
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-80_135-207
Domain cluster:
rep: IMGVR_UViG_3300009616_000257-3300009616-Ga0116111_100275611__D486-632
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05050.20 best | Methyltransf_21 | 41.9 | 1.70e-10 | 47.3% | 30.1% |
D2
high
residues 83-130
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cov100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 48.0 | 3.05e-01 | 100.0% | 33.8% |
| 1pzxA02 | 2.20.28.50 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › DegV, N-terminal domain, peripheral subdomain | 0.54 | 37.0 | 4.08e-01 | 93.8% | 100.0% |
| 1j3wC00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.51 | 37.0 | 2.84e-01 | 83.3% | 99.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3732370 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.52 | 45.0 | 4.21e-01 | 100.0% | 93.3% |
| 3249243 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 41.0 | 3.25e-01 | 97.9% | 64.4% |
| 3274364 | 560.1.1.0 ↗ | few secondary structure elements › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain › H-NS histone-like proteins, C-terminal domain | 0.50 | 41.0 | 4.09e-01 | 93.8% | 93.9% |
| 4095963 | 192.8.1.446 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › SKICH | 0.50 | 41.0 | 2.66e-01 | 100.0% | 22.1% |