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IMGVR_UViG_3300027510_000055-3300027510-Ga0209537_100396318

Arc-Vir

IMGVR_UViG_3300027510_000055-3300027510-Ga0209537_100396318

Quality

68.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 7-68
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8azbA01 3.10.105.10 Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 0.75 34.0 2.24e-01 71.0% 11.7%
1nigA00 1.20.1200.10 Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like 0.66 42.0 3.21e-01 82.3% 28.1%
4tmaJ00 3.30.50.10 Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A 0.59 51.0 5.29e-01 91.9% 100.0%
5eyaF00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.54 33.0 3.13e-01 74.2% 48.7%
2pw4A00 1.10.3300.10 Mainly Alpha › Orthogonal Bundle › Jann2411-like fold › Jann2411-like domain 0.54 41.0 2.91e-01 80.6% 55.7%
2fqmA01 6.10.140.830 Special › Helix non-globular › Helix Hairpins › 0.52 36.0 4.10e-01 71.0% 100.0%
3lxqA01 3.30.1120.80 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.50 33.0 2.91e-01 74.2% 43.4%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5018523 377.1.1.0 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.78 67.0 6.48e-01 96.8% 88.6%
5022956 2002.1.1.0 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.67 48.0 3.18e-01 75.8% 21.4%
3729526 7516.1.1.79 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_trans_2_3 0.61 50.0 2.97e-01 100.0% 56.5%
3987428 3843.1.1.0 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.61 44.0 3.79e-01 77.4% 60.0%
3337346 2002.1.1.234 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Meth_synt_2+Meth_synt_1 0.59 46.0 3.12e-01 87.1% 39.2%
3295061 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.59 41.0 3.28e-01 72.6% 38.3%
1621265 2007.5.1.1 a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL 0.58 41.0 2.51e-01 77.4% 12.3%
4279367 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.56 40.0 3.62e-01 74.2% 62.5%
D2 medium residues 69-130
PDB