←Back to structures
IMGVR_UViG_3300027566_000018-3300027566-Ga0209639_100088926
Arc-VirIMGVR_UViG_3300027566_000018-3300027566-Ga0209639_100088926
Identity
- Kingdom:
- archaea
Quality
74.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 7-52
D2
medium
residues 60-91
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.83 | 70.0 | 6.85e-01 | 100.0% | 91.7% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.80 | 66.0 | 5.62e-01 | 100.0% | 58.9% |
| 3aa0B01 | 1.20.58.570 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › F-actin capping protein, alpha/beta subunit, N-terminal domain | 0.70 | 55.0 | 4.22e-01 | 100.0% | 38.6% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5029687 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.89 | 78.0 | 6.98e-01 | 100.0% | 71.1% |
| 5037997 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.84 | 71.0 | 6.70e-01 | 100.0% | 80.0% |
| 5036396 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.82 | 68.0 | 6.49e-01 | 100.0% | 82.1% |
| 4475754 | 4076.2.1.5 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like › MRNIP | 0.81 | 67.0 | 5.45e-01 | 100.0% | 49.2% |
| 4263982 | 375.1.1.302 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › MRNIP | 0.81 | 67.0 | 5.76e-01 | 100.0% | 58.2% |
| 3274032 | 375.1.1.211 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ima1_N | 0.80 | 67.0 | 6.10e-01 | 100.0% | 71.1% |
| 5040368 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 66.0 | 6.50e-01 | 100.0% | 91.4% |
| 5066735 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 66.0 | 5.85e-01 | 100.0% | 64.0% |
| 3612071 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 69.0 | 6.17e-01 | 100.0% | 71.1% |
| 5059205 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.79 | 66.0 | 6.24e-01 | 100.0% | 85.0% |
| 3592749 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 67.0 | 6.06e-01 | 100.0% | 73.3% |
| 4981040 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.78 | 64.0 | 6.14e-01 | 100.0% | 82.1% |
| 3995440 | 375.1.1.211 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ima1_N | 0.78 | 62.0 | 6.14e-01 | 100.0% | 91.4% |
| 3164762 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 62.0 | 5.92e-01 | 100.0% | 85.0% |
| 3731757 | 376.1.4.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog › IBR | 0.70 | 56.0 | 5.23e-01 | 100.0% | 77.8% |
| 3723241 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.70 | 57.0 | 4.79e-01 | 100.0% | 56.7% |
| 3484821 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.70 | 51.0 | 4.23e-01 | 87.5% | 70.8% |
| 3257149 | 375.1.1.51 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_9 | 0.67 | 51.0 | 5.35e-01 | 93.8% | 100.0% |
| 3400851 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 56.0 | 5.09e-01 | 100.0% | 71.1% |
| 3268723 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.66 | 55.0 | 5.43e-01 | 100.0% | 94.3% |
| 5034313 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 47.0 | 4.74e-01 | 100.0% | 91.4% |
| 5071927 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.64 | 50.0 | 4.36e-01 | 96.9% | 65.5% |
| 3612780 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.60 | 41.0 | 2.80e-01 | 71.9% | 51.1% |
| 3188758 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 47.0 | 4.39e-01 | 100.0% | 86.7% |
| 3612783 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.56 | 38.0 | 2.70e-01 | 71.9% | 44.5% |