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IMGVR_UViG_3300027566_000018-3300027566-Ga0209639_10008899
Arc-VirIMGVR_UViG_3300027566_000018-3300027566-Ga0209639_10008899
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 32-99
Domain cluster:
representative
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ozbE02 | 1.10.246.90 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › Nop domain | 0.65 | 54.0 | 4.74e-01 | 95.6% | 76.6% |
| 5y6qB02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.64 | 55.0 | 4.76e-01 | 95.6% | 96.2% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.64 | 40.0 | 3.84e-01 | 89.7% | 54.5% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 56.0 | 3.96e-01 | 100.0% | 68.0% |
| 1ezvC00 | 1.20.810.10 | Mainly Alpha › Up-down Bundle › Cytochrome Bc1 Complex; Chain C › Cytochrome Bc1 Complex; Chain C | 0.63 | 45.0 | 2.80e-01 | 75.0% | 25.7% |
| 1zpyA00 | 6.10.140.1960 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 46.0 | 4.14e-01 | 88.2% | 57.1% |
| 3sqiA01 | 1.10.150.540 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.63 | 52.0 | 4.63e-01 | 92.6% | 64.6% |
| 1ohuA00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.63 | 51.0 | 3.92e-01 | 91.2% | 37.6% |
| 3byiD00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.62 | 54.0 | 3.85e-01 | 98.5% | 43.1% |
| 1u84A00 | 1.10.340.20 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain | 0.62 | 48.0 | 4.58e-01 | 85.3% | 91.4% |
| 3k2jA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.61 | 49.0 | 4.06e-01 | 86.8% | 87.6% |
| 5g5gB02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.61 | 51.0 | 4.69e-01 | 98.5% | 87.2% |
| 4uyeA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.59 | 49.0 | 4.22e-01 | 92.6% | 85.3% |
| 3hmfA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.59 | 48.0 | 4.14e-01 | 94.1% | 83.6% |
| 3terA00 | 1.10.287.3550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 46.0 | 3.80e-01 | 83.8% | 48.7% |
| 6yttA01 | 1.10.8.190 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Carbon monoxide dehydrogenase alpha subunit. Chain M, domain 1 | 0.59 | 49.0 | 4.30e-01 | 91.2% | 63.0% |
| 4wzxA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.58 | 49.0 | 4.81e-01 | 97.1% | 85.3% |
| 4yonA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.57 | 48.0 | 3.36e-01 | 92.6% | 49.5% |
| 1ewrA02 | 1.10.1420.10 | Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › | 0.57 | 50.0 | 4.22e-01 | 100.0% | 58.0% |
| 1uurA01 | 1.20.58.240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 | 0.57 | 49.0 | 4.16e-01 | 94.1% | 84.5% |
| 7zxkC01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.57 | 50.0 | 3.87e-01 | 98.5% | 74.0% |
| 1f68A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.57 | 45.0 | 3.98e-01 | 89.7% | 87.4% |
| 1y97A01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.56 | 38.0 | 2.76e-01 | 86.8% | 24.0% |
| 1wjtA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.56 | 40.0 | 3.53e-01 | 76.5% | 77.7% |
| 3cnhB02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.56 | 42.0 | 4.23e-01 | 82.4% | 98.5% |
| 1t98A02 | 1.20.58.590 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chromosome partition protein MukF, middle domain | 0.55 | 48.0 | 3.67e-01 | 98.5% | 64.4% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.55 | 48.0 | 3.80e-01 | 95.6% | 68.1% |
| 1x9fA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 39.0 | 3.18e-01 | 77.9% | 82.3% |
| 2ef8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 39.0 | 3.70e-01 | 77.9% | 88.1% |
| 2p0tA01 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.54 | 33.0 | 3.22e-01 | 100.0% | 51.3% |
| 3vw4A01 | 1.10.340.50 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.54 | 44.0 | 4.10e-01 | 94.1% | 73.9% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.54 | 48.0 | 4.63e-01 | 97.1% | 100.0% |
| 2ppxA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.54 | 30.0 | 3.12e-01 | 79.4% | 55.7% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.53 | 43.0 | 4.02e-01 | 89.7% | 78.8% |
| 2ozbB01 | 1.10.287.4070 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 42.0 | 3.56e-01 | 94.1% | 77.9% |
| 6ofuA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 40.0 | 2.65e-01 | 80.9% | 90.3% |
| 2lt3A01 | 1.20.58.1290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain | 0.52 | 38.0 | 3.33e-01 | 97.1% | 52.0% |
| 2lm9A00 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 45.0 | 4.02e-01 | 97.1% | 88.5% |
| 1dqeA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.51 | 41.0 | 3.46e-01 | 97.1% | 48.2% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5074896 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.75 | 44.0 | 3.08e-01 | 76.5% | 20.0% |
| 4978056 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.74 | 44.0 | 3.02e-01 | 76.5% | 19.6% |
| 5065970 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.73 | 44.0 | 2.99e-01 | 82.4% | 18.4% |
| 3219192 | 181.1.1.0 ↗ | alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins | 0.71 | 49.0 | 4.61e-01 | 72.1% | 71.4% |
| 5051259 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.70 | 42.0 | 2.86e-01 | 77.9% | 18.8% |
| 5012907 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.67 | 57.0 | 4.00e-01 | 95.6% | 30.5% |
| 3546846 | 189.1.1.2 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP | 0.66 | 56.0 | 3.98e-01 | 94.1% | 42.0% |
| 3789554 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.65 | 55.0 | 5.01e-01 | 94.1% | 96.7% |
| 3593507 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.64 | 49.0 | 3.36e-01 | 85.3% | 25.0% |
| 3253021 | 189.1.1.2 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP | 0.63 | 52.0 | 3.73e-01 | 94.1% | 41.9% |
| 4991684 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.62 | 49.0 | 3.27e-01 | 98.5% | 21.8% |
| 3329196 | 604.6.1.1 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT | 0.62 | 49.0 | 4.30e-01 | 85.3% | 73.0% |
| 3347740 | 3560.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 | 0.61 | 51.0 | 4.16e-01 | 94.1% | 96.9% |
| 3787754 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.61 | 50.0 | 3.45e-01 | 89.7% | 66.7% |
| 4989951 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.61 | 51.0 | 3.23e-01 | 95.6% | 19.7% |
| 3168103 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.61 | 49.0 | 4.37e-01 | 86.8% | 71.6% |
| 3484317 | 633.1.1.0 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain | 0.60 | 49.0 | 3.99e-01 | 89.7% | 76.9% |
| 3358888 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.58 | 50.0 | 4.24e-01 | 92.6% | 59.1% |
| 3254975 | 603.2.1.2 ↗ | alpha bundles › STAT-like › STAT › STAT › Dict-STAT-coil | 0.58 | 48.0 | 3.99e-01 | 88.2% | 73.9% |
| 3643236 | 633.12.1.18 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › PF26751 | 0.58 | 47.0 | 3.88e-01 | 91.2% | 50.0% |
| 3475253 | 189.1.1.2 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP | 0.58 | 49.0 | 3.61e-01 | 100.0% | 46.0% |
| 3931889 | 633.1.1.1 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain | 0.58 | 46.0 | 3.97e-01 | 91.2% | 81.7% |
| 3971851 | 206.1.1.17 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo | 0.57 | 41.0 | 2.89e-01 | 82.4% | 22.1% |
| 3931888 | 633.1.1.1 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain | 0.56 | 45.0 | 3.73e-01 | 89.7% | 78.4% |
| 4437969 | 563.1.1.1 ↗ | alpha bundles › ATPD N-terminal domain-like › N-terminal domain of the delta subunit of the F1F0-ATP synthase › N-terminal domain of the delta subunit of the F1F0-ATP synthase › OSCP | 0.56 | 38.0 | 2.97e-01 | 70.6% | 47.1% |
| 4979920 | 2007.1.14.7 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › HGD-D | 0.55 | 47.0 | 3.14e-01 | 91.2% | 28.6% |
| 3270399 | 133.1.1.1 ↗ | alpha bundles › DH domain-like › DBL homology domain (DH-domain) › DBL homology domain (DH-domain) › RhoGEF | 0.53 | 44.0 | 3.23e-01 | 91.2% | 56.8% |
| 3782567 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.53 | 45.0 | 2.82e-01 | 100.0% | 62.3% |
| None | — | 0.51 | 36.0 | 3.80e-01 | 72.1% | 93.3% |