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IMGVR_UViG_3300027691_000031-3300027691-Ga0209485_100082910
Arc-VirIMGVR_UViG_3300027691_000031-3300027691-Ga0209485_100082910
Identity
- Kingdom:
- archaea
Quality
70.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-38
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xb1A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.78 | 63.0 | 4.70e-01 | 92.1% | 44.8% |
| 3aslA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.76 | 65.0 | 5.31e-01 | 94.7% | 55.9% |
| 1wevA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.76 | 65.0 | 5.42e-01 | 94.7% | 64.1% |
| 5sviB00 | 3.30.40.100 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › | 0.70 | 56.0 | 4.96e-01 | 86.8% | 71.7% |
| 4n4fA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 54.0 | 5.40e-01 | 89.5% | 85.0% |
| 5fb0C01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.65 | 55.0 | 4.80e-01 | 100.0% | 63.9% |
| 4xxbB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.64 | 41.0 | 3.95e-01 | 89.5% | 59.5% |
| 2zetC00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.63 | 50.0 | 3.40e-01 | 94.7% | 24.1% |
| 2ayjA00 | 4.10.1060.50 | Few Secondary Structures › Irregular › ZNF265 like › | 0.61 | 39.0 | 3.49e-01 | 89.5% | 42.9% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.60 | 41.0 | 3.77e-01 | 76.3% | 80.4% |
| 2ds5A00 | 6.20.220.10 | Special › Other non-globular › Erythroid Transcription Factor GATA-1; Chain A › ClpX chaperone, C4-type zinc finger domain | 0.58 | 46.0 | 4.44e-01 | 94.7% | 79.1% |
| 3p2aA01 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.57 | 42.0 | 4.38e-01 | 89.5% | 86.1% |
| 6xi7B02 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.56 | 41.0 | 4.14e-01 | 92.1% | 79.5% |
| 2epcA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.54 | 35.0 | 3.72e-01 | 92.1% | 72.7% |
| 2vp7A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 42.0 | 3.68e-01 | 100.0% | 57.6% |
| 2f9iD00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.52 | 42.0 | 2.56e-01 | 94.7% | 92.9% |
| 3m7nA03 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.51 | 34.0 | 3.50e-01 | 92.1% | 76.5% |
| 2xjyA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.51 | 40.0 | 3.55e-01 | 94.7% | 63.5% |
| 6nw1A00 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.51 | 38.0 | 3.72e-01 | 89.5% | 77.8% |
| 4aybP00 | 2.20.28.30 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase ii, chain L | 0.51 | 34.0 | 3.38e-01 | 89.5% | 59.1% |
| 3mwmA02 | 3.30.1490.190 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain | 0.51 | 42.0 | 3.79e-01 | 92.1% | 96.2% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3243231 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.74 | 64.0 | 5.49e-01 | 97.4% | 61.7% |
| 3504441 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.73 | 62.0 | 5.86e-01 | 94.7% | 82.2% |
| 3577178 | 376.1.3.18 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD_5 | 0.73 | 62.0 | 4.75e-01 | 97.4% | 41.1% |
| 3912396 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.73 | 65.0 | 5.72e-01 | 100.0% | 70.9% |
| 3782442 | 109.4.1.736 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PHD | 0.72 | 65.0 | 3.80e-01 | 100.0% | 42.0% |
| 3216239 | 376.1.3.9 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD_2 | 0.71 | 57.0 | 4.80e-01 | 94.7% | 67.1% |
| 3461252 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.71 | 59.0 | 5.04e-01 | 92.1% | 58.3% |
| 3637043 | 376.1.3.9 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD_2 | 0.71 | 57.0 | 5.31e-01 | 94.7% | 72.0% |
| 3788090 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 58.0 | 3.79e-01 | 100.0% | 21.7% |
| 3707652 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.68 | 52.0 | 4.94e-01 | 92.1% | 70.0% |
| 3707814 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.68 | 55.0 | 5.72e-01 | 89.5% | 100.0% |
| 3425436 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.66 | 54.0 | 5.41e-01 | 94.7% | 90.0% |
| 4062734 | 377.1.1.110 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF30316 | 0.66 | 56.0 | 5.54e-01 | 94.7% | 92.5% |
| 3530062 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.64 | 53.0 | 4.46e-01 | 92.1% | 55.4% |
| 4965365 | 375.1.1.336 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF7129 | 0.64 | 42.0 | 4.40e-01 | 89.5% | 83.3% |
| 3534273 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.64 | 53.0 | 5.22e-01 | 92.1% | 90.0% |
| 3269360 | 375.4.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like | 0.64 | 41.0 | 4.32e-01 | 92.1% | 80.0% |
| 3697767 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 40.0 | 3.29e-01 | 92.1% | 32.0% |
| 3845537 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.63 | 49.0 | 5.10e-01 | 86.8% | 94.3% |
| 4966035 | 376.1.3.98 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › DUF7562 | 0.63 | 52.0 | 4.49e-01 | 94.7% | 73.3% |
| 4027754 | 376.1.1.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ | 0.62 | 52.0 | 4.77e-01 | 94.7% | 72.0% |
| 3253247 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 52.0 | 4.39e-01 | 94.7% | 55.4% |
| 4015975 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.61 | 51.0 | 5.08e-01 | 94.7% | 90.0% |
| 5016230 | 375.1.1.64 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RUBY_RBDX | 0.61 | 40.0 | 4.01e-01 | 92.1% | 65.0% |
| 4325327 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.60 | 40.0 | 4.18e-01 | 92.1% | 74.3% |
| 5041606 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.60 | 50.0 | 4.22e-01 | 94.7% | 55.4% |
| 3397474 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.60 | 52.0 | 5.17e-01 | 100.0% | 97.5% |
| 3443925 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 39.0 | 4.27e-01 | 94.7% | 100.0% |
| 3313010 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.59 | 47.0 | 4.35e-01 | 92.1% | 70.0% |
| 5013997 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 40.0 | 3.84e-01 | 92.1% | 57.8% |
| 5068907 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 44.0 | 4.24e-01 | 92.1% | 73.3% |
| 3388521 | 375.1.1.219 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4H2 | 0.58 | 37.0 | 3.92e-01 | 92.1% | 80.0% |
| 3596753 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 43.0 | 4.10e-01 | 92.1% | 80.0% |
| 3817938 | 376.1.2.2 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 | 0.56 | 46.0 | 3.95e-01 | 100.0% | 72.9% |
| 3712859 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.56 | 43.0 | 4.32e-01 | 94.7% | 87.5% |
| 4967657 | 375.1.1.325 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › OapC | 0.56 | 39.0 | 3.75e-01 | 92.1% | 62.2% |
| 3646133 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 45.0 | 4.34e-01 | 94.7% | 80.0% |
| 3566304 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.55 | 47.0 | 4.71e-01 | 92.1% | 87.5% |
| 3487979 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 36.0 | 3.75e-01 | 89.5% | 83.3% |
| 4954096 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.55 | 37.0 | 2.55e-01 | 89.5% | 18.2% |
| 4979219 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 39.0 | 3.91e-01 | 92.1% | 72.5% |
| 3188197 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.53 | 36.0 | 3.76e-01 | 92.1% | 82.4% |
| 3667602 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.53 | 42.0 | 3.55e-01 | 94.7% | 94.3% |
| 3550281 | 376.1.1.66 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_16 | 0.52 | 40.0 | 3.40e-01 | 94.7% | 56.0% |
| 3268019 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.52 | 39.0 | 3.44e-01 | 92.1% | 52.3% |
| 4944281 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.51 | 37.0 | 3.69e-01 | 94.7% | 77.5% |
| 3726704 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.51 | 39.0 | 3.57e-01 | 86.8% | 62.3% |
| 5049855 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.50 | 39.0 | 3.55e-01 | 94.7% | 60.0% |