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IMGVR_UViG_3300027706_000155-3300027706-Ga0209581_100337120
Arc-VirIMGVR_UViG_3300027706_000155-3300027706-Ga0209581_100337120
Identity
- Kingdom:
- archaea
Quality
69.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-73
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 43.0 | 4.41e-01 | 90.8% | 63.5% |
| 2o7tA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.68 | 53.0 | 3.86e-01 | 86.2% | 33.5% |
| 2nutB01 | 1.20.120.730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sec23/Sec24 helical domain | 0.68 | 58.0 | 4.53e-01 | 100.0% | 65.4% |
| 1qsdA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 42.0 | 3.65e-01 | 89.2% | 41.2% |
| 1m2vB01 | 1.20.120.730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sec23/Sec24 helical domain | 0.67 | 57.0 | 4.33e-01 | 100.0% | 63.3% |
| 2rklF00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.66 | 38.0 | 4.25e-01 | 100.0% | 73.1% |
| 3kyzA00 | 3.30.450.170 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Two-component histidine kinase, sensor domain | 0.65 | 59.0 | 4.84e-01 | 98.5% | 90.2% |
| 1tqgA00 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.65 | 55.0 | 4.69e-01 | 93.8% | 91.4% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.64 | 53.0 | 4.62e-01 | 92.3% | 85.0% |
| 2yevA03 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.63 | 52.0 | 3.84e-01 | 93.8% | 71.2% |
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.63 | 52.0 | 4.32e-01 | 90.8% | 94.8% |
| 1iurA01 | 1.10.287.110 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain | 0.63 | 42.0 | 4.32e-01 | 70.8% | 92.1% |
| 4b94A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.60 | 48.0 | 3.83e-01 | 90.8% | 66.0% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.60 | 42.0 | 3.60e-01 | 100.0% | 46.6% |
| 1xd4A04 | 1.10.840.10 | Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain | 0.60 | 48.0 | 3.38e-01 | 90.8% | 58.3% |
| 1ileA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.59 | 47.0 | 3.46e-01 | 89.2% | 60.2% |
| 3ph0C00 | 1.25.40.1040 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.59 | 39.0 | 4.24e-01 | 78.5% | 83.0% |
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.59 | 47.0 | 3.99e-01 | 92.3% | 81.5% |
| 2qr6A02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 47.0 | 2.98e-01 | 89.2% | 74.6% |
| 6lpfA01 | 1.10.730.20 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › | 0.58 | 46.0 | 3.49e-01 | 86.2% | 58.3% |
| 2rpaA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.58 | 39.0 | 3.72e-01 | 95.4% | 59.7% |
| 3ziuA01 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.57 | 44.0 | 3.09e-01 | 86.2% | 36.2% |
| 2v0cA04 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.57 | 44.0 | 3.40e-01 | 86.2% | 61.6% |
| 2nr4A02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.56 | 40.0 | 4.18e-01 | 89.2% | 82.8% |
| 3h3mA00 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.54 | 41.0 | 3.73e-01 | 83.1% | 74.2% |
| 3tulB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.53 | 41.0 | 3.22e-01 | 96.9% | 39.8% |
| 4hs2A00 | 1.25.40.420 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 36.0 | 3.70e-01 | 81.5% | 73.4% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.51 | 40.0 | 3.72e-01 | 100.0% | 67.1% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.51 | 40.0 | 3.56e-01 | 100.0% | 58.8% |
| 2v5cA03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.50 | 44.0 | 3.53e-01 | 98.5% | 88.5% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4371208 | 198.1.1.1 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_2 | 0.74 | 66.0 | 6.20e-01 | 100.0% | 94.9% |
| 4872582 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.70 | 42.0 | 4.50e-01 | 92.3% | 69.0% |
| 3583380 | 101.1.2.558 ↗ | alpha arrays › HTH › HTH › winged helix domain › CCD_aECM | 0.66 | 52.0 | 5.35e-01 | 86.2% | 96.7% |
| 4340169 | 601.3.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt | 0.63 | 53.0 | 4.30e-01 | 93.8% | 67.5% |
| 5046905 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 48.0 | 4.35e-01 | 86.2% | 71.1% |
| 3994468 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.61 | 41.0 | 4.02e-01 | 92.3% | 64.3% |
| 3214091 | 109.27.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain › BACK_BPM_SPOP | 0.61 | 39.0 | 4.08e-01 | 80.0% | 71.7% |
| 5048255 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 47.0 | 3.11e-01 | 87.7% | 26.3% |
| 3991367 | 101.1.2.558 ↗ | alpha arrays › HTH › HTH › winged helix domain › CCD_aECM | 0.60 | 45.0 | 4.78e-01 | 83.1% | 100.0% |
| 4979974 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.60 | 41.0 | 4.39e-01 | 100.0% | 83.6% |
| 3783378 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.59 | 40.0 | 4.22e-01 | 80.0% | 76.7% |
| 4943613 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.59 | 42.0 | 4.21e-01 | 98.5% | 73.8% |
| 3629701 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.58 | 40.0 | 3.71e-01 | 100.0% | 55.3% |
| 3969479 | 628.1.1.0 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain | 0.58 | 50.0 | 4.00e-01 | 100.0% | 67.9% |
| 3927550 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.57 | 37.0 | 3.89e-01 | 80.0% | 73.3% |
| 4217710 | 628.1.1.1 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD | 0.57 | 49.0 | 3.87e-01 | 100.0% | 68.3% |
| 3288486 | 628.1.1.1 ↗ | alpha bundles › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › Fatty acid responsive transcription factor FadR, C-terminal domain › FCD | 0.55 | 46.0 | 3.72e-01 | 100.0% | 66.7% |
| 3225286 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.55 | 36.0 | 3.78e-01 | 80.0% | 73.3% |
| 3192999 | 2003.1.5.120 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Bmt2 | 0.53 | 41.0 | 2.84e-01 | 92.3% | 22.3% |
| 3930076 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.51 | 33.0 | 3.44e-01 | 73.8% | 71.7% |