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IMGVR_UViG_3300027784_001492-3300027784-Ga0207421_100137047

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300027784_001492-3300027784-Ga0207421_100137047 ↗
Kingdom:: archaea

Quality

73.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-96

PDB

Domain cluster: representative

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1on2A02	1.10.60.10	Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain	0.72	26.0	3.17e-01	81.7%	47.6%
3p0uA00	1.10.565.10	Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor	0.60	50.0	3.86e-01	92.5%	65.3%
2a6hF01	1.20.120.1810	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) ›	0.59	46.0	3.69e-01	86.0%	42.6%
1ichA00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.56	39.0	4.00e-01	72.0%	86.2%
4rgxB00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.55	45.0	4.02e-01	96.8%	61.9%
3s2wG00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.55	44.0	4.00e-01	90.3%	69.2%
2vsgA02	1.10.470.10	Mainly Alpha › Orthogonal Bundle › Variant Surface Glycoprotein, subunit A; domain 2 › Variant Surface Glycoprotein, subunit A, domain 2	0.53	39.0	3.33e-01	79.6%	81.2%
2fbkA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.52	44.0	3.76e-01	100.0%	55.8%
1sg6A02	1.20.1090.10	Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain	0.52	45.0	3.62e-01	100.0%	90.9%
7oq4Z01	1.20.120.950	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062	0.51	35.0	3.53e-01	94.6%	68.4%
3mzvA00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.51	43.0	3.11e-01	97.8%	61.8%
3uitA02	1.20.1270.460	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.51	39.0	3.60e-01	86.0%	76.2%
1kyqA03	1.10.3280.10	Mainly Alpha › Orthogonal Bundle › Siro heme synthase C-terminal domain-like › Siroheme synthase; domain 3	0.50	37.0	3.87e-01	89.2%	85.7%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3972910	101.1.1.58 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_18	0.67	41.0	4.78e-01	89.2%	87.7%
5080963	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.66	48.0	4.98e-01	96.8%	81.2%
3193435	3755.3.1.451 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › BUD22	0.59	45.0	4.05e-01	82.8%	98.5%
3723553	102.1.1.0 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like	0.55	37.0	3.98e-01	100.0%	81.2%
3471793	188.1.1.0 ↗	alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain	0.53	45.0	3.04e-01	100.0%	43.3%
3610597	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.53	34.0	3.00e-01	82.8%	42.1%
280629	188.1.1.1 ↗	alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep	0.52	44.0	3.41e-01	100.0%	81.4%
3709633	509.1.1.9 ↗	alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain › PAH_ZNF598	0.51	35.0	3.50e-01	82.8%	68.0%
3713697	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.51	37.0	2.60e-01	79.6%	58.9%

D2 high residues 99-183

PDB