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IMGVR_UViG_3300027784_001492-3300027784-Ga0207421_100137049
Arc-VirIMGVR_UViG_3300027784_001492-3300027784-Ga0207421_100137049
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 86-189_329-371
Domain cluster:
rep: IMGVR_UViG_3300026204_000079-3300026204-Ga0208521_10073952__D89-176_214-226_315-343_439-514
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2n99A00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.51 | 26.0 | 3.43e-01 | 85.7% | 92.1% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3700599 | 3945.1.1.1 ↗ | alpha superhelices › N-terminal fragment of dynein heavy chain › N-terminal fragment of dynein heavy chain › N-terminal fragment of dynein heavy chain › DHC_N1 | 0.56 | 38.0 | 2.58e-01 | 81.6% | 17.6% |
| 3924581 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.56 | 29.0 | 3.59e-01 | 87.8% | 80.0% |
| 4598948 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.50 | 24.0 | 3.31e-01 | 81.0% | 96.9% |
D2
medium
residues 190-328
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yc9A02 | 2.20.200.10 | Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.52 | 29.0 | 3.53e-01 | 100.0% | 88.0% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963566 | 4056.1.1.5 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › P22_portal | 0.74 | 45.0 | 4.43e-01 | 100.0% | 56.4% |
| 1429395 | 4056.1.1.5 ↗ | beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › P22_portal | 0.64 | 54.0 | 4.74e-01 | 100.0% | 63.1% |
| 3270049 | 331.3.1.17 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VASt | 0.56 | 34.0 | 3.00e-01 | 100.0% | 43.1% |
D3
medium
residues 372-422