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IMGVR_UViG_3300027815_000166-3300027815-Ga0209726_1000692913
Arc-VirIMGVR_UViG_3300027815_000166-3300027815-Ga0209726_1000692913
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 27-73
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yskA00 | 1.10.490.110 | Mainly Alpha › Orthogonal Bundle › Globin-like › Uncharacterized conserved protein DUF2267 | 0.76 | 66.0 | 4.62e-01 | 100.0% | 31.9% |
| 1y9bA00 | 1.20.5.780 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Single helix bin | 0.73 | 55.0 | 4.65e-01 | 85.1% | 48.1% |
| 2damA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.69 | 46.0 | 4.13e-01 | 70.2% | 56.7% |
| 1xaxA00 | 3.40.390.30 | Alpha Beta › 3-Layer(aba) Sandwich › Collagenase (Catalytic Domain) › "Metalloproteases (""zincins""), catalytic domain" | 0.63 | 45.0 | 3.20e-01 | 76.6% | 76.4% |
| 6jrpA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.58 | 44.0 | 4.18e-01 | 95.7% | 68.9% |
| 1j09A04 | 1.10.8.70 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1 | 0.55 | 40.0 | 4.03e-01 | 76.6% | 75.0% |
| 4jfcA02 | 1.10.12.10 | Mainly Alpha › Orthogonal Bundle › Lyase 2-enoyl-coa Hydratase; Chain A, domain 2 › Lyase 2-enoyl-coa Hydratase, Chain A, domain 2 | 0.54 | 46.0 | 4.34e-01 | 95.7% | 82.1% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5030348 | 101.1.11.38 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF2683 | 0.83 | 61.0 | 5.07e-01 | 87.2% | 46.3% |
| 5029586 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.82 | 59.0 | 4.91e-01 | 85.1% | 45.0% |
| 3005818 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.73 | 53.0 | 4.89e-01 | 93.6% | 59.7% |
| 5005270 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.72 | 62.0 | 4.76e-01 | 100.0% | 70.9% |
| 3807164 | 101.1.11.3 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TCP | 0.69 | 56.0 | 5.35e-01 | 95.7% | 80.0% |
| 3583380 | 101.1.2.558 ↗ | alpha arrays › HTH › HTH › winged helix domain › CCD_aECM | 0.69 | 45.0 | 4.23e-01 | 72.3% | 53.3% |
| 3969571 | 2004.1.1.417 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran, AAA_21 | 0.65 | 46.0 | 2.63e-01 | 76.6% | 8.5% |
| 3793382 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.65 | 49.0 | 3.82e-01 | 80.9% | 38.0% |
| 3496279 | 206.1.2.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin | 0.55 | 46.0 | 2.65e-01 | 95.7% | 16.0% |
| 4929448 | 2484.1.1.107 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS1595 | 0.53 | 39.0 | 2.91e-01 | 85.1% | 29.7% |