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IMGVR_UViG_3300027838_001930-3300027838-Ga0209089_100168971

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300027838_001930-3300027838-Ga0209089_100168971 ↗
Kingdom:: archaea

Quality

68.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-57

PDB

Domain cluster: representative

CATH (15)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5a48B00	3.30.420.610	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like	0.65	43.0	3.64e-01	87.0%	39.6%
4fcyA01	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.60	41.0	3.69e-01	90.7%	50.0%
4tpsD00	3.30.300.180	Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › DnaA, N-terminal domain	0.59	46.0	4.01e-01	85.2%	86.9%
1xn8A00	1.10.3230.10	Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › YqbG-like	0.57	49.0	3.76e-01	100.0%	51.1%
2om6A02	1.10.150.400	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 ›	0.55	46.0	4.08e-01	96.3%	97.5%
1x4qA01	1.20.1390.10	Mainly Alpha › Up-down Bundle › PWI domain › PWI domain	0.54	37.0	3.54e-01	75.9%	98.6%
4mloA03	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.53	41.0	3.94e-01	83.3%	82.0%
4evfA02	1.10.220.10	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin	0.53	39.0	3.58e-01	81.5%	66.2%
4ye6A02	1.10.10.2420	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A ›	0.52	39.0	3.90e-01	88.9%	81.0%
1n00A03	1.10.220.10	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin	0.52	38.0	3.51e-01	81.5%	71.2%
1dk5A02	1.10.220.10	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin	0.52	39.0	3.60e-01	83.3%	73.6%
4evfA01	1.10.220.10	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin	0.51	38.0	3.56e-01	83.3%	71.8%
3cvvA02	1.25.40.80	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat ›	0.51	36.0	2.79e-01	75.9%	50.4%
1avcA07	1.10.220.10	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin	0.51	38.0	3.46e-01	83.3%	61.3%
4evfA04	1.10.220.10	Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin	0.50	36.0	3.40e-01	77.8%	92.8%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3431444	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.64	42.0	4.13e-01	70.4%	60.0%
4179226	3171.1.1.1 ↗	alpha arrays › Nitrogenase gamma subunit N-terminal domain › Nitrogenase gamma subunit N-terminal domain › Nitrogenase gamma subunit N-terminal domain › DIMCO_N	0.62	47.0	4.19e-01	85.2%	62.5%
3718264	2008.1.1.31 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › VRR_NUC	0.60	47.0	3.02e-01	88.9%	51.2%
3264713	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.57	44.0	4.17e-01	90.7%	68.6%
4965255	2484.1.1.264 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF3800	0.57	45.0	3.01e-01	92.6%	20.9%
3787144	101.1.1.8 ↗	alpha arrays › HTH › HTH › Three-helical HTH › TEA	0.53	41.0	3.73e-01	85.2%	66.7%
3492110	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.52	38.0	3.71e-01	85.2%	75.4%
3488744	101.1.17.0 ↗	alpha arrays › HTH › HTH › FF domain	0.51	39.0	3.74e-01	88.9%	80.0%
3447822	2004.1.1.56 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC	0.50	44.0	3.17e-01	100.0%	54.4%