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IMGVR_UViG_3300027886_000012-3300027886-Ga0209486_100001757
Arc-VirIMGVR_UViG_3300027886_000012-3300027886-Ga0209486_100001757
Identity
- Kingdom:
- archaea
Quality
83.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-41
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3vd6C01 | 3.30.50.10 | Alpha Beta › 2-Layer Sandwich › Erythroid Transcription Factor GATA-1; Chain A › Erythroid Transcription Factor GATA-1, subunit A | 0.86 | 69.0 | 6.79e-01 | 100.0% | 82.9% |
| 2d8yA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.79 | 66.0 | 5.41e-01 | 100.0% | 51.4% |
| 2dloA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.77 | 63.0 | 5.02e-01 | 100.0% | 45.7% |
| 1vx7000 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.70 | 59.0 | 5.17e-01 | 100.0% | 64.5% |
| 1r79A01 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.68 | 55.0 | 5.03e-01 | 94.9% | 67.3% |
| 3o58V00 | 2.30.170.20 | Mainly Beta › Roll › Ribosomal Protein L24e; Chain: T; › Ribosomal protein L24 | 0.64 | 50.0 | 4.63e-01 | 100.0% | 67.8% |
| 3goxA02 | 3.30.60.130 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.64 | 54.0 | 4.95e-01 | 100.0% | 77.8% |
| 2cjsC01 | 3.30.60.120 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.64 | 52.0 | 5.26e-01 | 100.0% | 100.0% |
| 3ho6B00 | 3.40.50.11050 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › MARTX cysteine protease (CPD) domain | 0.62 | 42.0 | 2.59e-01 | 71.8% | 11.5% |
| 4r2yC00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.59 | 45.0 | 4.09e-01 | 97.4% | 73.8% |
| 3ua3A03 | 2.70.160.11 | Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 | 0.52 | 34.0 | 2.25e-01 | 71.8% | 13.3% |
| 2yreA01 | 3.30.40.150 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › TRAF-like zinc-finger, N-terminal subdomain | 0.52 | 37.0 | 3.56e-01 | 87.2% | 78.0% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3729281 | 377.1.1.93 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Paired_CXXCH_1 | 0.85 | 66.0 | 6.81e-01 | 94.9% | 97.1% |
| 3491199 | 376.1.3.16 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › ADD_ATRX | 0.84 | 71.0 | 7.06e-01 | 100.0% | 95.0% |
| 3568676 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.79 | 64.0 | 6.70e-01 | 92.3% | 100.0% |
| 3372361 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.79 | 68.0 | 6.79e-01 | 97.4% | 95.0% |
| 4068879 | 375.1.1.235 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › ADD_ATRX | 0.77 | 62.0 | 6.25e-01 | 100.0% | 95.0% |
| 2070859 | 377.1.1.29 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › TtuA_LIM_N | 0.73 | 50.0 | 5.53e-01 | 89.7% | 100.0% |
| 3624345 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.73 | 61.0 | 6.15e-01 | 97.4% | 95.0% |
| 5059659 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.73 | 62.0 | 6.21e-01 | 100.0% | 97.5% |
| 5031333 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.72 | 58.0 | 5.66e-01 | 94.9% | 93.3% |
| 2878975 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.70 | 59.0 | 4.80e-01 | 97.4% | 52.6% |
| 3731209 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.70 | 59.0 | 4.41e-01 | 97.4% | 40.0% |
| 3386240 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.70 | 59.0 | 3.54e-01 | 100.0% | 14.2% |
| 3608274 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.70 | 61.0 | 5.45e-01 | 100.0% | 89.1% |
| 3545890 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.69 | 56.0 | 5.04e-01 | 97.4% | 63.3% |
| 3680502 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.69 | 60.0 | 4.09e-01 | 100.0% | 28.6% |
| 3400916 | 377.1.1.20 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Vps39_2 | 0.69 | 55.0 | 5.34e-01 | 100.0% | 82.2% |
| 4027202 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.69 | 51.0 | 5.30e-01 | 89.7% | 97.0% |
| 4852319 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.68 | 53.0 | 4.90e-01 | 100.0% | 67.2% |
| 3175980 | 376.1.1.155 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_Vps41, PF31263 | 0.68 | 54.0 | 4.46e-01 | 100.0% | 90.6% |
| 3395083 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.68 | 51.0 | 5.21e-01 | 92.3% | 100.0% |
| 3702317 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.67 | 54.0 | 4.68e-01 | 94.9% | 90.8% |
| 4932487 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.67 | 55.0 | 4.60e-01 | 94.9% | 54.3% |
| 4942722 | 377.1.1.6 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_L24e | 0.67 | 57.0 | 4.58e-01 | 100.0% | 51.2% |
| 3221411 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.67 | 52.0 | 4.43e-01 | 100.0% | 48.8% |
| 4359679 | 376.1.1.37 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › SLX1_C | 0.67 | 55.0 | 4.71e-01 | 100.0% | 72.9% |
| 3242788 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.66 | 51.0 | 4.36e-01 | 100.0% | 48.8% |
| 3993660 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.66 | 52.0 | 4.25e-01 | 97.4% | 69.4% |
| 3446236 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.66 | 53.0 | 4.80e-01 | 100.0% | 80.0% |
| 5068940 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.66 | 51.0 | 4.19e-01 | 94.9% | 45.0% |
| 3394478 | 377.1.1.16 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-FCS | 0.65 | 52.0 | 5.10e-01 | 97.4% | 93.3% |
| 3331318 | 376.1.1.40 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_11 | 0.65 | 51.0 | 4.56e-01 | 100.0% | 63.1% |
| 3384566 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.65 | 51.0 | 4.55e-01 | 100.0% | 78.5% |
| 3890958 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.63 | 49.0 | 2.89e-01 | 94.9% | 11.7% |
| 3275422 | 376.1.1.12 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING-like | 0.62 | 49.0 | 4.64e-01 | 94.9% | 74.0% |
| 3712912 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.62 | 50.0 | 4.62e-01 | 97.4% | 89.1% |
| 3522976 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 48.0 | 4.07e-01 | 100.0% | 85.0% |
| 3489926 | 377.12.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › RPL34 › RPL34 › Ribosomal_L34e | 0.61 | 53.0 | 3.73e-01 | 100.0% | 40.0% |
| 3786603 | 376.1.1.106 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF29452 | 0.61 | 47.0 | 3.98e-01 | 100.0% | 53.8% |
| 3503103 | 376.1.1.16 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › FANCL_C | 0.60 | 49.0 | 4.13e-01 | 100.0% | 52.0% |
| 3546355 | 376.1.3.66 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › zf_RING_Vps8 | 0.59 | 47.0 | 4.14e-01 | 97.4% | 63.1% |
| 3726704 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.59 | 45.0 | 4.19e-01 | 94.9% | 66.0% |
| 3861347 | 376.1.1.122 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf_RING_Vps8 | 0.58 | 46.0 | 4.17e-01 | 97.4% | 68.3% |
| 3253519 | 377.1.1.118 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf_RING_Vps8 | 0.58 | 46.0 | 4.32e-01 | 94.9% | 74.0% |
| 3663944 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.57 | 46.0 | 3.99e-01 | 100.0% | 55.7% |
| 3199477 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.57 | 41.0 | 4.23e-01 | 89.7% | 94.3% |
| 3688382 | 376.1.1.106 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › PF29452 | 0.56 | 44.0 | 4.16e-01 | 100.0% | 72.7% |
| 3260392 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.55 | 42.0 | 2.51e-01 | 97.4% | 22.6% |