←Back to structures
IMGVR_UViG_3300027896_000487-3300027896-Ga0209777_100069899
Arc-VirIMGVR_UViG_3300027896_000487-3300027896-Ga0209777_100069899
Identity
- Kingdom:
- archaea
Quality
82.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-65
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yueA02 | 2.10.10.40 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.71 | 39.0 | 4.01e-01 | 100.0% | 54.1% |
| 1x0pE02 | 1.10.287.1540 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 35.0 | 3.93e-01 | 91.9% | 88.9% |
| 2odrD03 | 6.10.250.3340 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.51 | 35.0 | 3.91e-01 | 72.6% | 100.0% |
| 2acvA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.50 | 34.0 | 2.52e-01 | 72.6% | 50.8% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4967982 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.75 | 50.0 | 5.65e-01 | 100.0% | 97.7% |
| 4988095 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.65 | 45.0 | 4.94e-01 | 100.0% | 92.0% |
| 5020205 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 52.0 | 3.67e-01 | 98.4% | 52.7% |
| 5050213 | 192.2.1.87 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ATP-synt_D | 0.58 | 40.0 | 2.90e-01 | 72.6% | 41.1% |
| 3716093 | 101.1.2.169 ↗ | alpha arrays › HTH › HTH › winged helix domain › PheRS_DBD3 | 0.53 | 46.0 | 3.86e-01 | 100.0% | 100.0% |