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IMGVR_UViG_3300027896_000487-3300027896-Ga0209777_100069899

Arc-Vir

IMGVR_UViG_3300027896_000487-3300027896-Ga0209777_100069899

Quality

82.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-65
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1yueA02 2.10.10.40 Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › 0.71 39.0 4.01e-01 100.0% 54.1%
1x0pE02 1.10.287.1540 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.55 35.0 3.93e-01 91.9% 88.9%
2odrD03 6.10.250.3340 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.51 35.0 3.91e-01 72.6% 100.0%
2acvA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.50 34.0 2.52e-01 72.6% 50.8%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4967982 4076.4.1.0 a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain 0.75 50.0 5.65e-01 100.0% 97.7%
4988095 4076.3.1.0 a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain 0.65 45.0 4.94e-01 100.0% 92.0%
5020205 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 52.0 3.67e-01 98.4% 52.7%
5050213 192.2.1.87 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ATP-synt_D 0.58 40.0 2.90e-01 72.6% 41.1%
3716093 101.1.2.169 alpha arrays › HTH › HTH › winged helix domain › PheRS_DBD3 0.53 46.0 3.86e-01 100.0% 100.0%