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IMGVR_UViG_3300027932_000098-3300027932-Ga0208429_10001432
Arc-VirIMGVR_UViG_3300027932_000098-3300027932-Ga0208429_10001432
Identity
- Kingdom:
- archaea
Quality
48.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 205-305
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4akgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.59 | 47.0 | 4.19e-01 | 89.1% | 69.9% |
| 1gakA00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.58 | 40.0 | 3.73e-01 | 72.3% | 71.5% |
| 1d8bA00 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.55 | 39.0 | 4.33e-01 | 92.1% | 92.6% |
| 3fxhA00 | 1.20.120.600 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Crystal structure from the mobile metagenome of halifax harbour sewage outfall | 0.55 | 35.0 | 3.41e-01 | 94.1% | 57.5% |
| 2hivA01 | 1.10.3260.10 | Mainly Alpha › Orthogonal Bundle › DNA ligase i, domain 1 › DNA ligase, ATP-dependent, N-terminal domain | 0.53 | 39.0 | 3.07e-01 | 77.2% | 46.8% |
| 1u61A00 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.52 | 37.0 | 3.50e-01 | 74.3% | 94.5% |
| 3tbiB02 | 6.10.140.1670 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 33.0 | 3.33e-01 | 95.0% | 65.0% |
| 3ezuA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 42.0 | 3.52e-01 | 93.1% | 90.1% |
| 6ks6q01 | 1.10.560.10 | Mainly Alpha › Orthogonal Bundle › GROEL; domain 1 › GroEL-like equatorial domain | 0.50 | 43.0 | 3.11e-01 | 92.1% | 85.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3433575 | 101.1.1.138 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › GeBP-like_DBD | 0.67 | 30.0 | 3.17e-01 | 92.1% | 43.2% |
| 3385758 | 514.1.1.1 ↗ | alpha bundles › YutG-like › YutG-like › YutG-like › PgpA | 0.56 | 48.0 | 4.21e-01 | 94.1% | 74.0% |
| 3920864 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.55 | 44.0 | 3.99e-01 | 88.1% | 93.1% |
| 4264762 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.52 | 37.0 | 2.68e-01 | 73.3% | 79.3% |
| 5031991 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.52 | 45.0 | 3.63e-01 | 97.0% | 59.0% |
| 4029394 | 4964.1.1.2 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › RNA_pol | 0.52 | 44.0 | 3.53e-01 | 92.1% | 54.4% |
| 5080196 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.51 | 44.0 | 3.48e-01 | 97.0% | 56.4% |
| 3947260 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 38.0 | 3.15e-01 | 80.2% | 51.4% |
| 4942136 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.51 | 45.0 | 3.68e-01 | 98.0% | 62.2% |
D2
high
residues 347-424
D3
medium
residues 12-129_146-200
D4
medium
residues 450-539
D5
medium
residues 540-602