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IMGVR_UViG_3300027933_000019-3300027933-Ga0208549_1024916
Arc-VirIMGVR_UViG_3300027933_000019-3300027933-Ga0208549_1024916
Identity
- Kingdom:
- archaea
Quality
65.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 8-94
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v9dB00 | 1.20.58.2220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Formin, FH2 domain | 0.60 | 55.0 | 3.70e-01 | 100.0% | 62.0% |
| 3ztaA00 | 1.10.490.130 | Mainly Alpha › Orthogonal Bundle › Globin-like › | 0.60 | 50.0 | 4.26e-01 | 89.7% | 94.2% |
| 1zp2A01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.59 | 47.0 | 4.34e-01 | 87.4% | 80.9% |
| 6o0aA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 46.0 | 3.92e-01 | 88.5% | 86.6% |
| 2qg7B02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.57 | 48.0 | 3.51e-01 | 96.6% | 77.1% |
| 2oifB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 44.0 | 3.73e-01 | 85.1% | 88.1% |
| 1oj6A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 40.0 | 3.43e-01 | 80.5% | 91.2% |
| 1ursB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 36.0 | 2.92e-01 | 72.4% | 68.8% |
| 3rkoG00 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 46.0 | 4.38e-01 | 95.4% | 84.0% |
| 2fzfA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.52 | 47.0 | 3.89e-01 | 98.9% | 97.3% |
| 3ei3A04 | 1.10.150.910 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.52 | 37.0 | 3.78e-01 | 77.0% | 85.9% |
| 3gl5A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 38.0 | 2.95e-01 | 79.3% | 44.5% |
| 2as0A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 42.0 | 3.16e-01 | 89.7% | 87.6% |
| 7eu3E01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 46.0 | 4.61e-01 | 98.9% | 97.7% |
| 3ajmB02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.50 | 42.0 | 3.62e-01 | 100.0% | 58.6% |
| 4r2fA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 40.0 | 3.15e-01 | 88.5% | 90.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3613875 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 51.0 | 3.10e-01 | 98.9% | 42.3% |
| 4467403 | 4990.1.1.1 ↗ | alpha arrays › Lipase chaperone LifO-like › Lipase chaperone LifO-like › Lipase chaperone LifO-like › Lipase_chap | 0.60 | 50.0 | 3.55e-01 | 94.3% | 50.2% |
| 3960385 | 2007.1.19.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like | 0.60 | 41.0 | 2.80e-01 | 71.3% | 87.4% |
| 1276702 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.59 | 46.0 | 4.53e-01 | 87.4% | 95.9% |
| 3960847 | 101.1.1.266 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut | 0.59 | 46.0 | 4.02e-01 | 83.9% | 65.4% |
| 3212096 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 42.0 | 3.69e-01 | 94.3% | 52.3% |
| 3720488 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.54 | 40.0 | 3.47e-01 | 78.2% | 70.8% |
| 5036394 | 101.1.9.152 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_28 | 0.52 | 39.0 | 3.15e-01 | 79.3% | 64.7% |
| 3768701 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 39.0 | 2.68e-01 | 94.3% | 21.9% |
| 3216729 | 109.4.1.273 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PI4KB-PIK1_PIK | 0.51 | 37.0 | 3.53e-01 | 87.4% | 62.7% |
| 4029984 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.50 | 40.0 | 2.77e-01 | 85.1% | 79.0% |
| 5013228 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.50 | 40.0 | 3.24e-01 | 86.2% | 46.5% |