←Back to structures
IMGVR_UViG_3300027933_000059-3300027933-Ga0208549_1032452
Arc-VirIMGVR_UViG_3300027933_000059-3300027933-Ga0208549_1032452
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 31-128
Domain cluster:
rep: IMGVR_UViG_3300026627_000066-3300026627-Ga0208548_10070618__D22-110
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.71 | 35.0 | 3.58e-01 | 98.0% | 48.4% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 42.0 | 4.67e-01 | 81.6% | 84.0% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.65 | 59.0 | 5.44e-01 | 100.0% | 80.0% |
| 4nspA00 | 3.30.2170.10 | Alpha Beta › 2-Layer Sandwich › archaeoglobus fulgidus dsm 4304 fold › archaeoglobus fulgidus dsm 4304 superfamily | 0.64 | 50.0 | 3.78e-01 | 83.7% | 73.5% |
| 8in8C01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.64 | 50.0 | 3.74e-01 | 85.7% | 74.0% |
| 2f1xB00 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.63 | 43.0 | 3.82e-01 | 70.4% | 78.9% |
| 7vd7A01 | 3.10.450.530 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system | 0.62 | 36.0 | 3.77e-01 | 100.0% | 60.9% |
| 2hqsA01 | 3.40.50.10070 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TolB, N-terminal domain | 0.62 | 45.0 | 3.98e-01 | 76.5% | 87.3% |
| 4bs9A05 | 3.30.160.660 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 53.0 | 5.08e-01 | 100.0% | 86.0% |
| 3f6gA01 | 3.30.160.740 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 34.0 | 4.15e-01 | 70.4% | 100.0% |
| 3fsdA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 33.0 | 3.07e-01 | 98.0% | 45.5% |
| 1ffvB04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.56 | 44.0 | 3.57e-01 | 85.7% | 89.4% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.56 | 46.0 | 3.88e-01 | 93.9% | 88.4% |
| 6x6aA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 46.0 | 3.36e-01 | 95.9% | 48.0% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 31.0 | 3.60e-01 | 77.6% | 87.3% |
| 2w38A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 45.0 | 3.14e-01 | 92.9% | 49.8% |
| 3hrdB01 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.52 | 39.0 | 3.35e-01 | 79.6% | 97.6% |
| 4wrnA03 | 2.60.40.4100 | Mainly Beta › Sandwich › Immunoglobulin-like › Zona pellucida, ZP-C domain | 0.52 | 46.0 | 3.87e-01 | 100.0% | 93.1% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 30.0 | 3.56e-01 | 81.6% | 88.9% |
| 1iz6A01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 31.0 | 3.50e-01 | 77.6% | 82.6% |
| 2wy4A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 45.0 | 4.04e-01 | 98.0% | 97.1% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 30.0 | 3.47e-01 | 81.6% | 84.8% |
| 1t3qB04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.51 | 39.0 | 3.19e-01 | 83.7% | 87.6% |
| 4hvtA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 42.0 | 3.04e-01 | 94.9% | 42.1% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 32.0 | 3.65e-01 | 76.5% | 87.5% |
| 4dy0B02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.50 | 40.0 | 3.68e-01 | 84.7% | 96.1% |
| 2g8sB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 45.0 | 3.09e-01 | 99.0% | 47.8% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4054729 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.69 | 46.0 | 5.13e-01 | 77.6% | 88.0% |
| 3363185 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.69 | 50.0 | 3.47e-01 | 85.7% | 23.1% |
| 4508852 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.68 | 50.0 | 4.79e-01 | 77.6% | 89.6% |
| 3368394 | 4325.1.1.11 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › PF27041 | 0.67 | 49.0 | 5.04e-01 | 87.8% | 80.0% |
| 3707085 | 5.1.2.33 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 | 0.66 | 46.0 | 3.53e-01 | 71.4% | 45.0% |
| 3364721 | 2484.1.1.165 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.66 | 47.0 | 3.64e-01 | 90.8% | 33.5% |
| 3658408 | 4325.1.1.13 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF4371 | 0.66 | 45.0 | 5.03e-01 | 73.5% | 92.0% |
| 3566243 | 2484.1.1.239 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, PF27046, PF27073 | 0.65 | 51.0 | 3.25e-01 | 83.7% | 21.0% |
| 3531937 | 2484.1.1.317 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF28925 | 0.65 | 51.0 | 3.20e-01 | 82.7% | 20.6% |
| 3928581 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.65 | 50.0 | 3.15e-01 | 82.7% | 19.2% |
| 3562870 | 2484.1.1.204 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 | 0.65 | 50.0 | 3.16e-01 | 81.6% | 20.2% |
| 3297423 | 2484.1.1.198 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 | 0.65 | 51.0 | 3.10e-01 | 83.7% | 16.7% |
| 3413200 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 52.0 | 3.33e-01 | 85.7% | 21.4% |
| 3841343 | 2484.1.1.239 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, PF27046, PF27073 | 0.64 | 51.0 | 3.21e-01 | 84.7% | 20.4% |
| 3916761 | 2484.1.1.198 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT, DUF4371 | 0.64 | 50.0 | 3.24e-01 | 83.7% | 22.2% |
| 3507177 | 2484.1.1.204 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 | 0.64 | 49.0 | 3.21e-01 | 81.6% | 23.6% |
| 3537025 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 50.0 | 3.11e-01 | 84.7% | 18.2% |
| 3651732 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.64 | 49.0 | 3.61e-01 | 83.7% | 38.5% |
| 3780866 | 2484.1.1.204 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 | 0.64 | 50.0 | 3.17e-01 | 84.7% | 20.4% |
| 3676745 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.63 | 50.0 | 4.46e-01 | 84.7% | 75.0% |
| 3517477 | 2484.1.1.230 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 | 0.63 | 48.0 | 4.72e-01 | 89.8% | 75.2% |
| 3508989 | 2484.1.1.230 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 | 0.63 | 48.0 | 4.17e-01 | 81.6% | 63.9% |
| 3776862 | 2484.1.1.50 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Dimer_Tnp_hAT | 0.63 | 50.0 | 3.18e-01 | 84.7% | 21.5% |
| 3663874 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.63 | 50.0 | 3.29e-01 | 84.7% | 26.0% |
| 3412961 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.63 | 49.0 | 3.17e-01 | 92.9% | 18.7% |
| 3571382 | 2484.1.1.204 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 | 0.63 | 49.0 | 3.09e-01 | 83.7% | 19.8% |
| 3527214 | 2484.1.1.204 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 | 0.62 | 49.0 | 3.13e-01 | 84.7% | 21.3% |
| 4552605 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.62 | 42.0 | 4.65e-01 | 70.4% | 91.0% |
| 3924083 | 2484.1.1.204 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 | 0.62 | 50.0 | 4.17e-01 | 91.8% | 50.6% |
| 5022726 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.62 | 33.0 | 4.18e-01 | 88.8% | 98.0% |
| 3677504 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.61 | 49.0 | 4.51e-01 | 85.7% | 75.2% |
| 3504143 | 2484.1.1.230 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27073 | 0.61 | 47.0 | 4.06e-01 | 83.7% | 63.1% |
| 4030017 | 837.1.1.0 ↗ | a+b two layers › Ribosomal protein S16 › Ribosomal protein S16 › Ribosomal protein S16 | 0.61 | 43.0 | 4.78e-01 | 87.8% | 96.0% |
| 3500942 | 330.1.1.3 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer | 0.61 | 45.0 | 4.35e-01 | 77.6% | 73.6% |
| 3835039 | 330.1.1.3 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer | 0.61 | 45.0 | 4.21e-01 | 77.6% | 69.2% |
| 3677519 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.60 | 48.0 | 3.66e-01 | 85.7% | 40.9% |
| 3987891 | 2003.6.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB | 0.60 | 43.0 | 2.97e-01 | 73.5% | 39.4% |
| 3460838 | 2484.1.1.157 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF4371 | 0.60 | 47.0 | 3.35e-01 | 84.7% | 33.1% |
| 4024735 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.60 | 39.0 | 4.44e-01 | 100.0% | 92.9% |
| 3327232 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.60 | 49.0 | 3.44e-01 | 88.8% | 31.8% |
| 4343392 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.59 | 52.0 | 5.04e-01 | 99.0% | 96.4% |
| 4989872 | 2484.1.1.59 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › NurA | 0.58 | 44.0 | 2.99e-01 | 81.6% | 34.5% |
| 4345080 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.58 | 34.0 | 4.00e-01 | 81.6% | 87.7% |
| 4336711 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.57 | 45.0 | 3.46e-01 | 86.7% | 63.5% |
| 5055106 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 40.0 | 3.18e-01 | 90.8% | 36.6% |
| 5054267 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 49.0 | 3.57e-01 | 92.9% | 44.5% |
| 3444588 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.55 | 42.0 | 2.87e-01 | 81.6% | 46.0% |
| 3925433 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.55 | 42.0 | 4.04e-01 | 82.7% | 82.6% |
| 3272078 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.55 | 49.0 | 3.47e-01 | 95.9% | 38.9% |
| 4195924 | 5.1.4.277 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_EIPR1 | 0.54 | 46.0 | 3.02e-01 | 91.8% | 40.5% |
| 3197023 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.54 | 44.0 | 2.92e-01 | 87.8% | 30.1% |
| 3311424 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.54 | 46.0 | 3.29e-01 | 95.9% | 89.4% |
| 3851797 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.53 | 42.0 | 3.54e-01 | 84.7% | 70.9% |
| 3257412 | 331.9.1.4 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla | 0.53 | 38.0 | 3.68e-01 | 76.5% | 100.0% |
| 3712567 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.53 | 47.0 | 3.83e-01 | 99.0% | 61.6% |
| 3730441 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.52 | 43.0 | 2.99e-01 | 91.8% | 50.9% |
| 4642457 | 12.3.1.50 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › PF28395 | 0.52 | 43.0 | 3.07e-01 | 93.9% | 76.0% |
| 3711360 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 42.0 | 3.04e-01 | 88.8% | 58.2% |
| 3726520 | 11.2.1.17 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › NT-C2 | 0.52 | 47.0 | 3.98e-01 | 100.0% | 85.6% |
| 3797604 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.51 | 45.0 | 3.05e-01 | 95.9% | 34.3% |