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IMGVR_UViG_3300027933_000112-3300027933-Ga0208549_1029631
Arc-VirIMGVR_UViG_3300027933_000112-3300027933-Ga0208549_1029631
Identity
- Kingdom:
- archaea
Quality
71.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-67
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1n7vA01 | 2.105.10.10 | Mainly Beta › 3 Propeller › Pseudo beta propeller › Pseudo beta propeller | 0.64 | 45.0 | 3.30e-01 | 73.1% | 40.1% |
| 6aonA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.64 | 43.0 | 3.58e-01 | 70.1% | 95.1% |
| 5jozA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.62 | 47.0 | 3.05e-01 | 82.1% | 27.9% |
| 2h7fX02 | 3.90.15.10 | Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 | 0.59 | 40.0 | 2.73e-01 | 70.1% | 27.0% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 40.0 | 3.25e-01 | 73.1% | 42.6% |
| 3c6kA02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.56 | 38.0 | 4.03e-01 | 70.1% | 89.3% |
| 3akhA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 46.0 | 3.05e-01 | 95.5% | 51.9% |
| 3na2A00 | 3.40.1570.20 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › | 0.55 | 39.0 | 3.19e-01 | 77.6% | 71.7% |
| 1vqwA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 44.0 | 2.81e-01 | 88.1% | 34.4% |
| 1sp4B00 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.55 | 41.0 | 3.08e-01 | 88.1% | 84.9% |
| 4gzvA00 | 2.40.128.490 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14869 family, DUF4488 | 0.54 | 36.0 | 2.91e-01 | 70.1% | 45.3% |
| 6aqgA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 40.0 | 3.14e-01 | 79.1% | 60.3% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 36.0 | 3.79e-01 | 73.1% | 83.9% |
| 1qh5A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 40.0 | 2.78e-01 | 91.0% | 58.5% |
| 1uirA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.51 | 35.0 | 3.82e-01 | 76.1% | 94.2% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5032809 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.60 | 41.0 | 3.28e-01 | 70.1% | 73.1% |
| 4966948 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.60 | 47.0 | 3.19e-01 | 91.0% | 72.4% |
| 4265943 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.59 | 50.0 | 3.36e-01 | 100.0% | 86.4% |
| 3687350 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 38.0 | 4.18e-01 | 71.6% | 81.8% |
| 4616207 | 4.1.1.448 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5372 | 0.58 | 40.0 | 4.43e-01 | 73.1% | 96.0% |
| 3238915 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.58 | 50.0 | 3.30e-01 | 100.0% | 94.3% |
| 4118552 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.58 | 39.0 | 3.76e-01 | 70.1% | 84.0% |
| 3511375 | 4.1.1.349 ↗ | beta barrels › SH3 › SH3 › SH3 › ROF | 0.57 | 37.0 | 3.47e-01 | 73.1% | 52.9% |
| 3699995 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 39.0 | 3.88e-01 | 73.1% | 71.4% |
| 3786775 | 109.54.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 | 0.56 | 47.0 | 2.82e-01 | 95.5% | 39.1% |
| 4183853 | 4.1.1.435 ↗ | beta barrels › SH3 › SH3 › SH3 › PF29216 | 0.56 | 39.0 | 3.86e-01 | 73.1% | 71.4% |
| 3715285 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.55 | 44.0 | 3.37e-01 | 88.1% | 82.6% |
| 3281618 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.55 | 38.0 | 3.38e-01 | 73.1% | 58.0% |
| 3817379 | 5.1.4.32 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N | 0.54 | 46.0 | 2.71e-01 | 94.0% | 95.8% |
| 5055172 | 3699.1.1.1 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N | 0.51 | 35.0 | 3.87e-01 | 71.6% | 87.3% |
| 5032454 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.51 | 40.0 | 3.31e-01 | 88.1% | 100.0% |
| 3492018 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 37.0 | 3.33e-01 | 82.1% | 89.5% |
| 4068291 | 3699.1.1.1 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N | 0.51 | 35.0 | 3.67e-01 | 73.1% | 80.0% |