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IMGVR_UViG_3300028030_000436-3300028030-Ga0256831_100033831
Arc-VirIMGVR_UViG_3300028030_000436-3300028030-Ga0256831_100033831
Identity
- Kingdom:
- archaea
Quality
67.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-86
Domain cluster:
rep: SRR1747065_scaffold_9_prodigal-single.1__X__X__00071__D7-53
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7s03A01 | 1.10.10.1450 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.75 | 53.0 | 5.87e-01 | 73.4% | 100.0% |
| 4iejA00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.75 | 59.0 | 5.65e-01 | 85.9% | 76.0% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.72 | 56.0 | 5.25e-01 | 85.9% | 69.2% |
| 3lcnB00 | 1.10.340.40 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain | 0.71 | 55.0 | 4.74e-01 | 82.8% | 70.1% |
| 3elkA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 60.0 | 5.14e-01 | 96.9% | 81.0% |
| 2bmuB00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.68 | 47.0 | 3.26e-01 | 73.4% | 77.9% |
| 6cc0A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.67 | 56.0 | 5.45e-01 | 92.2% | 88.6% |
| 4z4qA04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.66 | 50.0 | 4.59e-01 | 84.4% | 62.9% |
| 2co5A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 55.0 | 4.90e-01 | 95.3% | 80.4% |
| 2lh9A00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.65 | 51.0 | 4.85e-01 | 87.5% | 94.9% |
| 4jqfA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 51.0 | 4.98e-01 | 90.6% | 100.0% |
| 5dymA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 52.0 | 4.66e-01 | 93.8% | 85.4% |
| 7lxuE01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.64 | 44.0 | 3.05e-01 | 71.9% | 72.9% |
| 2g9wA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.64 | 50.0 | 5.02e-01 | 89.1% | 92.5% |
| 3mwmA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 55.0 | 5.24e-01 | 100.0% | 96.0% |
| 2xv9A00 | 1.10.533.30 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Nematode polyprotein allergen ABA-1 | 0.63 | 43.0 | 3.41e-01 | 70.3% | 46.3% |
| 3solA00 | 1.20.58.1630 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Chaperone lipoprotein PulS/OutS | 0.63 | 52.0 | 4.78e-01 | 96.9% | 87.9% |
| 2cg5B00 | 1.10.1200.10 | Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like | 0.63 | 42.0 | 4.15e-01 | 70.3% | 85.9% |
| 2p5kA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 52.0 | 5.27e-01 | 90.6% | 100.0% |
| 2mg4A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.63 | 50.0 | 5.05e-01 | 92.2% | 92.4% |
| 2qbyA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 52.0 | 4.78e-01 | 98.4% | 90.0% |
| 3lynB00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.62 | 44.0 | 3.55e-01 | 75.0% | 46.8% |
| 1rylA00 | 3.40.1760.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical protein yfbM fold › YfbM-like super family | 0.62 | 49.0 | 3.82e-01 | 92.2% | 75.2% |
| 1au7A01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.62 | 45.0 | 4.33e-01 | 76.6% | 79.2% |
| 4gbjC02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.61 | 47.0 | 3.80e-01 | 85.9% | 84.4% |
| 2hzdA00 | 6.10.20.40 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › TEA/ATTS domain | 0.60 | 48.0 | 4.44e-01 | 87.5% | 82.9% |
| 2nt2A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.60 | 44.0 | 3.40e-01 | 78.1% | 56.3% |
| 1h99A01 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.59 | 43.0 | 3.76e-01 | 79.7% | 92.3% |
| 1pbwB00 | 1.10.555.10 | Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein | 0.58 | 44.0 | 3.22e-01 | 84.4% | 47.2% |
| 3ol4A02 | 1.10.10.2390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.58 | 44.0 | 4.54e-01 | 85.9% | 93.3% |
| 1u84A00 | 1.10.340.20 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Apc36109-like domain | 0.57 | 44.0 | 4.21e-01 | 90.6% | 82.7% |
| 2jlnA00 | 1.10.4160.10 | Mainly Alpha › Orthogonal Bundle › Hydantoin permease › Hydantoin permease | 0.57 | 44.0 | 2.73e-01 | 92.2% | 54.6% |
| 3b0pA02 | 1.20.120.1460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.56 | 39.0 | 3.78e-01 | 73.4% | 74.7% |
| 1a41A02 | 1.20.120.380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 | 0.55 | 45.0 | 4.06e-01 | 95.3% | 81.9% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.54 | 33.0 | 2.70e-01 | 92.2% | 30.4% |
| 1wviA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.54 | 46.0 | 3.55e-01 | 95.3% | 80.7% |
| 1a3qA01 | 2.60.40.340 | Mainly Beta › Sandwich › Immunoglobulin-like › Rel homology domain (RHD), DNA-binding domain | 0.53 | 42.0 | 3.16e-01 | 90.6% | 62.0% |
| 1g2rA00 | 3.30.1230.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like | 0.53 | 39.0 | 3.59e-01 | 84.4% | 63.8% |
| 1u3dA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.52 | 41.0 | 3.39e-01 | 100.0% | 44.0% |
| 1yz4B01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.52 | 42.0 | 3.38e-01 | 100.0% | 62.7% |
| 3me5A01 | 1.10.260.140 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › | 0.51 | 42.0 | 4.20e-01 | 90.6% | 96.9% |
ECOD (98)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5047162 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.92 | 68.0 | 6.78e-01 | 76.6% | 76.9% |
| 4014657 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.90 | 70.0 | 7.56e-01 | 81.2% | 100.0% |
| 4978113 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.89 | 66.0 | 7.47e-01 | 78.1% | 100.0% |
| 3590835 | 101.1.1.266 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut | 0.89 | 59.0 | 6.94e-01 | 71.9% | 97.8% |
| 3980764 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 58.0 | 6.73e-01 | 73.4% | 100.0% |
| 3684956 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.86 | 66.0 | 6.63e-01 | 81.2% | 81.5% |
| 5013811 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.86 | 62.0 | 6.64e-01 | 75.0% | 92.7% |
| 5027952 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.84 | 66.0 | 7.01e-01 | 85.9% | 96.4% |
| 3255630 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.84 | 64.0 | 6.63e-01 | 81.2% | 86.7% |
| 3609939 | 101.1.1.3 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding | 0.84 | 69.0 | 5.77e-01 | 87.5% | 54.3% |
| 3723123 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.84 | 71.0 | 7.39e-01 | 93.8% | 96.7% |
| 3712226 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.84 | 69.0 | 5.94e-01 | 87.5% | 60.0% |
| 3909922 | 101.1.1.12 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 | 0.83 | 61.0 | 6.77e-01 | 78.1% | 98.0% |
| 3203378 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.83 | 64.0 | 6.37e-01 | 81.2% | 83.1% |
| 3740014 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.83 | 66.0 | 6.39e-01 | 84.4% | 98.6% |
| 3958338 | 101.1.1.266 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut | 0.83 | 56.0 | 6.43e-01 | 73.4% | 100.0% |
| 3961039 | 101.1.3.13 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Transposase_mut | 0.83 | 56.0 | 6.47e-01 | 73.4% | 100.0% |
| 5049118 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.82 | 72.0 | 7.25e-01 | 98.4% | 95.4% |
| 3597198 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.82 | 71.0 | 6.11e-01 | 92.2% | 71.6% |
| 3908865 | 101.1.2.536 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Tnp_Tc3_2 | 0.82 | 60.0 | 6.39e-01 | 78.1% | 89.1% |
| 3884711 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 64.0 | 6.44e-01 | 85.9% | 83.1% |
| 5079851 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 63.0 | 6.46e-01 | 82.8% | 88.3% |
| 4959187 | 101.1.2.489 ↗ | alpha arrays › HTH › HTH › winged helix domain › Transposase_mut | 0.81 | 58.0 | 6.36e-01 | 76.6% | 96.0% |
| 5053360 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 63.0 | 5.75e-01 | 85.9% | 63.5% |
| 4979322 | 101.1.2.140 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_AsnC-type | 0.81 | 60.0 | 5.87e-01 | 79.7% | 77.1% |
| 3910504 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.81 | 56.0 | 6.23e-01 | 78.1% | 94.0% |
| 3589089 | 101.1.2.489 ↗ | alpha arrays › HTH › HTH › winged helix domain › Transposase_mut | 0.80 | 62.0 | 5.21e-01 | 85.9% | 50.5% |
| 4927588 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 68.0 | 6.48e-01 | 92.2% | 85.3% |
| 3962597 | 101.1.3.13 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Transposase_mut | 0.80 | 57.0 | 5.70e-01 | 75.0% | 73.8% |
| 4274627 | 101.1.1.266 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut | 0.80 | 61.0 | 6.35e-01 | 85.9% | 88.3% |
| 4929815 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.80 | 65.0 | 6.47e-01 | 87.5% | 93.8% |
| 4926838 | 101.43.1.0 ↗ | alpha arrays › HTH › Phage G20C small terminase N-terminal domain › Phage G20C small terminase N-terminal domain | 0.80 | 66.0 | 6.57e-01 | 92.2% | 87.7% |
| 3958041 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 57.0 | 5.68e-01 | 76.6% | 73.8% |
| 3957316 | 101.1.1.266 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut | 0.79 | 56.0 | 5.66e-01 | 75.0% | 73.8% |
| 3243611 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.79 | 55.0 | 6.17e-01 | 78.1% | 94.0% |
| 4968187 | 101.1.2.619 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_33 | 0.78 | 59.0 | 5.88e-01 | 79.7% | 93.8% |
| 3487537 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 57.0 | 6.25e-01 | 79.7% | 100.0% |
| 3879117 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 59.0 | 6.22e-01 | 81.2% | 98.2% |
| 3740038 | 101.1.1.256 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Clr5 | 0.78 | 54.0 | 5.98e-01 | 75.0% | 94.0% |
| 5028095 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.78 | 64.0 | 5.39e-01 | 92.2% | 54.3% |
| 5070167 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 57.0 | 6.13e-01 | 84.4% | 90.9% |
| 5029224 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 63.0 | 6.45e-01 | 90.6% | 93.3% |
| 5049604 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.78 | 60.0 | 6.43e-01 | 85.9% | 96.4% |
| 3962579 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 63.0 | 4.79e-01 | 87.5% | 84.3% |
| 3604531 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.77 | 61.0 | 4.88e-01 | 85.9% | 44.8% |
| 3960847 | 101.1.1.266 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Transposase_mut | 0.77 | 59.0 | 4.67e-01 | 84.4% | 40.8% |
| 3617137 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.77 | 59.0 | 6.28e-01 | 82.8% | 100.0% |
| 3893171 | 101.1.1.12 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc3_2 | 0.77 | 60.0 | 6.20e-01 | 85.9% | 90.0% |
| 4053154 | 101.1.1.16 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_WhiA | 0.77 | 58.0 | 5.77e-01 | 84.4% | 78.5% |
| 5021354 | 101.1.2.619 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_33 | 0.76 | 55.0 | 5.54e-01 | 76.6% | 78.5% |
| 5079440 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.76 | 64.0 | 4.49e-01 | 92.2% | 96.9% |
| 5003693 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 57.0 | 5.73e-01 | 81.2% | 81.5% |
| 5007660 | 101.1.1.187 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_33 | 0.76 | 57.0 | 5.75e-01 | 81.2% | 83.1% |
| 5006610 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 56.0 | 5.75e-01 | 81.2% | 83.3% |
| 3709551 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.76 | 65.0 | 6.77e-01 | 98.4% | 100.0% |
| 3724068 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.76 | 57.0 | 6.06e-01 | 81.2% | 98.2% |
| 3931083 | 101.1.1.75 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_48 | 0.75 | 56.0 | 6.20e-01 | 78.1% | 100.0% |
| 4105352 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.75 | 64.0 | 4.08e-01 | 90.6% | 99.3% |
| 3933926 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.75 | 58.0 | 5.84e-01 | 85.9% | 83.1% |
| 5030453 | 2484.1.1.101 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 | 0.75 | 67.0 | 4.51e-01 | 100.0% | 94.5% |
| 4215069 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 55.0 | 4.89e-01 | 78.1% | 55.6% |
| 5027917 | 2484.1.1.101 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DDE_Tnp_IS240 | 0.75 | 66.0 | 4.46e-01 | 100.0% | 90.4% |
| 4950957 | 4156.1.1.7 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › DUF5814 | 0.74 | 63.0 | 4.72e-01 | 92.2% | 93.3% |
| 4977905 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.74 | 55.0 | 5.36e-01 | 84.4% | 72.9% |
| 5050956 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.74 | 63.0 | 3.96e-01 | 93.8% | 99.7% |
| 5046292 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 60.0 | 5.58e-01 | 89.1% | 88.7% |
| 4965915 | 4156.1.1.7 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › DUF5814 | 0.73 | 61.0 | 4.63e-01 | 92.2% | 96.7% |
| 3221523 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 67.0 | 5.90e-01 | 100.0% | 98.9% |
| 5083383 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 62.0 | 6.45e-01 | 96.9% | 98.3% |
| 5008720 | 101.1.1.548 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_32 | 0.73 | 57.0 | 5.72e-01 | 85.9% | 83.1% |
| 4958195 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.73 | 57.0 | 6.03e-01 | 87.5% | 100.0% |
| 3589159 | 101.1.2.488 ↗ | alpha arrays › HTH › HTH › winged helix domain › DDE_Tnp_IS66 | 0.73 | 62.0 | 5.89e-01 | 93.8% | 81.3% |
| 3618803 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.73 | 56.0 | 5.80e-01 | 82.8% | 91.7% |
| 5023957 | 101.1.2.280 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_12 | 0.72 | 61.0 | 5.71e-01 | 93.8% | 91.3% |
| 3961415 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.72 | 60.0 | 3.85e-01 | 92.2% | 91.1% |
| 3506369 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.71 | 63.0 | 3.97e-01 | 96.9% | 91.1% |
| 4994794 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 58.0 | 5.58e-01 | 92.2% | 98.7% |
| 4941699 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 61.0 | 5.79e-01 | 96.9% | 94.7% |
| 5035522 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.69 | 58.0 | 4.93e-01 | 93.8% | 74.3% |
| 4026717 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 56.0 | 5.46e-01 | 90.6% | 100.0% |
| 3987909 | 138.1.1.9 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C | 0.69 | 59.0 | 4.62e-01 | 95.3% | 72.6% |
| 4944051 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.69 | 57.0 | 4.22e-01 | 93.8% | 49.4% |
| 5031078 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.68 | 58.0 | 5.08e-01 | 96.9% | 81.0% |
| 4530535 | 2484.1.1.199 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Transposase_mut | 0.68 | 57.0 | 3.69e-01 | 95.3% | 91.7% |
| 5031662 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.68 | 58.0 | 4.69e-01 | 96.9% | 68.0% |
| 4995581 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.68 | 56.0 | 4.88e-01 | 93.8% | 83.0% |
| 4978855 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.67 | 58.0 | 4.76e-01 | 96.9% | 67.5% |
| 5028427 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.67 | 56.0 | 4.84e-01 | 95.3% | 72.4% |
| 4943782 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.66 | 55.0 | 4.56e-01 | 95.3% | 68.3% |
| 5041315 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.66 | 56.0 | 4.89e-01 | 96.9% | 85.0% |
| 5075771 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.66 | 57.0 | 4.77e-01 | 96.9% | 74.5% |
| 4963095 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.66 | 53.0 | 4.56e-01 | 92.2% | 72.5% |
| 4889887 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.65 | 54.0 | 4.16e-01 | 92.2% | 58.9% |
| 2685 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.65 | 55.0 | 4.95e-01 | 95.3% | 83.1% |
| 3422646 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.65 | 51.0 | 5.22e-01 | 87.5% | 95.0% |
| 4979997 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.63 | 51.0 | 4.05e-01 | 92.2% | 59.3% |
| 3619546 | 3712.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 | 0.58 | 40.0 | 4.02e-01 | 71.9% | 70.8% |
| 5053903 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 45.0 | 3.78e-01 | 100.0% | 90.0% |
D2
high
residues 95-150
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1vq8V00 | 1.10.287.310 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.77 | 62.0 | 5.90e-01 | 100.0% | 75.4% |
| 1ma1A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.75 | 63.0 | 6.16e-01 | 98.2% | 96.9% |
| 1b06A01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.74 | 63.0 | 6.00e-01 | 98.2% | 97.0% |
| 1luwA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.74 | 62.0 | 6.03e-01 | 98.2% | 96.9% |
| 4e4eA01 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.72 | 59.0 | 5.61e-01 | 98.2% | 97.2% |
| 4fvmA06 | 1.10.287.690 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain | 0.72 | 56.0 | 5.92e-01 | 92.9% | 100.0% |
| 2xzmO02 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.68 | 52.0 | 4.86e-01 | 89.3% | 67.1% |
| 1p49A02 | 1.10.287.550 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.65 | 55.0 | 5.49e-01 | 98.2% | 98.3% |