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IMGVR_UViG_3300028048_000061-3300028048-Ga0256405_10000343248

Arc-Vir

IMGVR_UViG_3300028048_000061-3300028048-Ga0256405_10000343248

Quality

71.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-61
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3ilkA02 1.10.8.590 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.65 52.0 4.99e-01 86.7% 92.6%
6j7xA01 1.25.40.120 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase 0.62 41.0 2.70e-01 70.0% 30.5%
4rflA02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.60 43.0 3.08e-01 78.3% 36.2%
1d3yB02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.56 38.0 2.63e-01 73.3% 23.0%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5079269 605.4.1.20 alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein › DUF6092 0.67 56.0 4.80e-01 91.7% 96.8%
3926720 130.1.1.0 alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif 0.64 44.0 4.33e-01 71.7% 93.8%
3927097 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.63 50.0 3.28e-01 90.0% 47.4%
4027820 190.1.1.1 alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.61 45.0 4.18e-01 76.7% 82.2%
3727606 103.1.1.3 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CRAL_TRIO_N 0.55 46.0 4.04e-01 93.3% 86.7%
3927220 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.55 45.0 4.41e-01 93.3% 90.8%
3458449 101.1.1.123 alpha arrays › HTH › HTH › Three-helical HTH › MCRS_N 0.53 43.0 3.94e-01 86.7% 78.8%