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IMGVR_UViG_3300028048_000061-3300028048-Ga0256405_1000034366
Arc-VirIMGVR_UViG_3300028048_000061-3300028048-Ga0256405_1000034366
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-97
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.87 | 49.0 | 6.17e-01 | 80.0% | 90.0% |
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.72 | 47.0 | 5.22e-01 | 91.6% | 83.1% |
| 3ic8A01 | 3.40.30.110 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.71 | 47.0 | 3.75e-01 | 81.1% | 35.6% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 49.0 | 5.22e-01 | 82.1% | 83.1% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 40.0 | 4.93e-01 | 78.9% | 96.4% |
| 1y96A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 48.0 | 5.07e-01 | 91.6% | 82.6% |
| 2p4tA00 | 2.30.30.60 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 41.0 | 4.94e-01 | 80.0% | 98.3% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 42.0 | 4.72e-01 | 78.9% | 84.5% |
| 1tg0A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.65 | 44.0 | 5.11e-01 | 76.8% | 100.0% |
| 2e12A00 | 2.30.30.720 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) | 0.63 | 47.0 | 4.83e-01 | 82.1% | 80.6% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 43.0 | 4.44e-01 | 74.7% | 95.6% |
| 2gu3A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 34.0 | 3.98e-01 | 72.6% | 83.1% |
| 2lc4A00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 40.0 | 3.76e-01 | 73.7% | 59.5% |
| 1vkdA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 42.0 | 2.96e-01 | 76.8% | 97.9% |
| 5yjwA00 | 3.50.50.100 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › | 0.55 | 41.0 | 2.64e-01 | 78.9% | 46.3% |
| 4fxdA05 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.54 | 37.0 | 3.46e-01 | 70.5% | 94.0% |
| 6htnA01 | 2.120.10.70 | Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin | 0.53 | 37.0 | 3.32e-01 | 72.6% | 97.8% |
| 1dgmA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 37.0 | 2.73e-01 | 74.7% | 84.1% |
| 2bvbA00 | 2.60.120.710 | Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 | 0.52 | 39.0 | 3.50e-01 | 81.1% | 87.6% |
| 2jzjA01 | 2.30.60.10 | Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N | 0.51 | 37.0 | 3.54e-01 | 76.8% | 81.1% |
| 3bt3A02 | 3.30.720.110 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.51 | 25.0 | 3.13e-01 | 72.6% | 77.2% |
| 3q48A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 33.0 | 3.49e-01 | 88.4% | 75.9% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 35.0 | 3.25e-01 | 74.7% | 55.8% |
| 3jcuO01 | 2.40.160.30 | Mainly Beta › Beta Barrel › Porin › Photosystem II, cytochrome c-550 precursor | 0.50 | 37.0 | 3.06e-01 | 77.9% | 94.3% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4293453 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 55.0 | 5.99e-01 | 89.5% | 86.3% |
| 4041376 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.76 | 55.0 | 5.99e-01 | 89.5% | 90.0% |
| 3989574 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 49.0 | 5.14e-01 | 78.9% | 72.9% |
| 3507639 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.75 | 50.0 | 5.70e-01 | 83.2% | 92.9% |
| 3924377 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 43.0 | 5.36e-01 | 77.9% | 100.0% |
| 4026408 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.73 | 50.0 | 4.91e-01 | 88.4% | 67.0% |
| 1778160 | 109.1.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 | 0.70 | 45.0 | 3.36e-01 | 81.1% | 26.2% |
| 4377781 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.69 | 52.0 | 5.64e-01 | 83.2% | 93.8% |
| 3736175 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 45.0 | 4.72e-01 | 78.9% | 74.1% |
| 5048974 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 52.0 | 4.92e-01 | 84.2% | 68.2% |
| 157624 | 4.1.1.47 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin6 | 0.68 | 48.0 | 5.07e-01 | 91.6% | 82.6% |
| 4426276 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 45.0 | 5.11e-01 | 77.9% | 95.7% |
| 4931822 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 41.0 | 4.79e-01 | 86.3% | 92.3% |
| 5031673 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 52.0 | 5.00e-01 | 83.2% | 80.0% |
| 4995784 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 45.0 | 4.95e-01 | 88.4% | 92.0% |
| 157526 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.63 | 41.0 | 4.90e-01 | 74.7% | 100.0% |
| 3907176 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.63 | 49.0 | 5.04e-01 | 82.1% | 90.0% |
| 3631298 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.63 | 46.0 | 5.08e-01 | 84.2% | 97.3% |
| 5020252 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.62 | 42.0 | 3.94e-01 | 82.1% | 55.0% |
| 3164555 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.62 | 38.0 | 3.28e-01 | 100.0% | 38.7% |
| 3217772 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 46.0 | 4.84e-01 | 81.1% | 87.1% |
| 3279614 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.61 | 43.0 | 3.65e-01 | 72.6% | 46.5% |
| 3991896 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.59 | 46.0 | 4.66e-01 | 84.2% | 84.2% |
| 3982999 | 4.1.1.60 ↗ | beta barrels › SH3 › SH3 › SH3 › YccV-like | 0.59 | 48.0 | 4.76e-01 | 91.6% | 83.0% |
| 3192398 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.58 | 40.0 | 2.53e-01 | 71.6% | 41.9% |
| 3782999 | 219.1.1.115 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AIM3_BBC1_C | 0.57 | 45.0 | 3.93e-01 | 85.3% | 69.0% |
| 3717566 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.56 | 38.0 | 2.83e-01 | 70.5% | 63.5% |
| 3576940 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 45.0 | 3.43e-01 | 92.6% | 39.1% |
| 4015014 | 267.1.1.0 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain | 0.52 | 40.0 | 2.92e-01 | 82.1% | 73.2% |
| 1144799 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.51 | 39.0 | 3.28e-01 | 81.1% | 96.2% |
| 3725498 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.50 | 35.0 | 3.95e-01 | 78.9% | 100.0% |
| 1097232 | 3180.1.1.1 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › EspG | 0.50 | 33.0 | 3.19e-01 | 71.6% | 58.9% |