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IMGVR_UViG_3300028161_000023-3300028161-Ga0265596_10031826
Arc-VirIMGVR_UViG_3300028161_000023-3300028161-Ga0265596_10031826
Identity
- Kingdom:
- archaea
Quality
71.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-71
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5nj8A01 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.82 | 54.0 | 6.19e-01 | 71.8% | 92.3% |
| 3l0oA01 | 1.10.720.10 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.72 | 46.0 | 5.38e-01 | 78.9% | 95.9% |
| 4zbwA02 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.68 | 50.0 | 4.69e-01 | 80.3% | 64.4% |
| 3txsC01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.67 | 42.0 | 4.21e-01 | 100.0% | 61.3% |
| 2qkwA00 | 1.20.1270.140 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AvrPto | 0.66 | 54.0 | 4.77e-01 | 88.7% | 99.0% |
| 2lfhA00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.61 | 43.0 | 4.40e-01 | 78.9% | 76.5% |
| 4jndA02 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.61 | 42.0 | 2.80e-01 | 71.8% | 27.0% |
| 3fb2A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 47.0 | 4.03e-01 | 80.3% | 100.0% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.60 | 41.0 | 3.83e-01 | 87.3% | 57.5% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 37.0 | 3.74e-01 | 70.4% | 66.7% |
| 2krxA01 | 3.90.940.40 | Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › Protein CHLORORESPIRATORY REDUCTION 7 | 0.56 | 40.0 | 4.07e-01 | 77.5% | 83.3% |
| 3vkgA15 | 1.10.8.1220 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.54 | 33.0 | 3.12e-01 | 91.5% | 46.8% |
| 3l4aA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.54 | 40.0 | 3.53e-01 | 85.9% | 72.7% |
| 4c0kA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 39.0 | 3.53e-01 | 85.9% | 75.2% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3269634 | 192.17.1.0 ↗ | alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like | 0.82 | 65.0 | 6.96e-01 | 93.0% | 100.0% |
| 3375525 | 148.1.1.10 ↗ | alpha arrays › Histone-like › Histone-related › Histone › TAFII28 | 0.76 | 51.0 | 4.31e-01 | 74.6% | 44.5% |
| 3724166 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.71 | 47.0 | 4.87e-01 | 84.5% | 73.8% |
| 4003631 | 109.4.1.1578 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30504 | 0.69 | 50.0 | 3.40e-01 | 76.1% | 38.4% |
| 3177225 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.68 | 53.0 | 4.91e-01 | 83.1% | 98.9% |
| 3343255 | 5.1.4.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 | 0.68 | 54.0 | 3.22e-01 | 85.9% | 12.7% |
| 3214016 | 6171.1.1.0 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases | 0.67 | 46.0 | 4.17e-01 | 71.8% | 87.4% |
| 3622049 | 130.1.1.2 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › LEM | 0.65 | 47.0 | 4.99e-01 | 77.5% | 98.3% |
| 3618523 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.60 | 47.0 | 4.33e-01 | 100.0% | 65.6% |
| 3342930 | 103.1.1.3 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › CRAL_TRIO_N | 0.58 | 39.0 | 3.90e-01 | 70.4% | 76.0% |
| 3652408 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.55 | 50.0 | 4.49e-01 | 97.2% | 90.5% |
| 3247744 | 192.4.1.12 ↗ | alpha bundles › Long alpha-hairpin › Ribosomal protein L29 (L29p) › Ribosomal protein L29 (L29p) › FmiP_Thoc5 | 0.54 | 50.0 | 4.30e-01 | 98.6% | 77.1% |
| 4992913 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 35.0 | 3.43e-01 | 80.3% | 60.0% |
| 3596560 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.51 | 47.0 | 3.91e-01 | 100.0% | 77.3% |