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IMGVR_UViG_3300028167_000009-3300028167-Ga0268285_10013276

Arc-Vir

IMGVR_UViG_3300028167_000009-3300028167-Ga0268285_10013276

Quality

73.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-59
PDB
D2 medium residues 316-350
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3hiaA00 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.55 32.0 2.67e-01 94.3% 25.8%
4fd0A01 2.60.40.3630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 40.0 3.27e-01 88.6% 51.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3537046 1155.1.1.1 few secondary structure elements › Shisa 3 N-terminal domain › Shisa 3 N-terminal domain › Shisa 3 N-terminal domain › Shisa_N 0.67 50.0 4.73e-01 100.0% 66.0%
4017465 928.1.1.0 few secondary structure elements › Bubble protein › Bubble protein › Bubble protein 0.62 47.0 4.39e-01 91.4% 93.9%
4067162 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.55 40.0 3.70e-01 100.0% 70.0%
D3 medium residues 358-430
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4eadA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.69 60.0 5.32e-01 100.0% 92.5%
5xdcB01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.66 50.0 4.44e-01 83.6% 80.2%
5af7A01 1.10.540.10 Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain 0.66 50.0 4.43e-01 83.6% 83.6%
4oiyA01 1.10.220.20 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › 0.63 52.0 5.04e-01 91.8% 88.9%
4c0aA01 1.10.220.20 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › 0.62 51.0 4.94e-01 91.8% 91.4%
2e2oA02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 49.0 3.76e-01 91.8% 96.4%
3h5qA01 1.20.970.10 Mainly Alpha › Up-down Bundle › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain A, domain 3 › Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 0.58 48.0 4.87e-01 93.2% 98.6%
1m62A00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.55 38.0 3.63e-01 72.6% 83.9%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2071357 5000.3.1.1 alpha arrays › Toxins' membrane translocation domains › Bcl-2 inhibitors of programmed cell death › Bcl-2 inhibitors of programmed cell death › Bcl-2 0.57 45.0 3.76e-01 90.4% 62.3%
4977086 1075.1.1.1 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane 0.56 43.0 3.11e-01 84.9% 97.4%
D4 medium residues 431-487_628-704
PDB
D5 medium residues 488-627
PDB