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IMGVR_UViG_3300028167_000071-3300028167-Ga0268285_10023378
Arc-VirIMGVR_UViG_3300028167_000071-3300028167-Ga0268285_10023378
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-131
Domain cluster:
rep: OP947159.1__WBC28288.1__DPMD02_24__00025__D7-135
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06199.18 best | Phage_tail_2 | 44.5 | 2.20e-11 | 94.3% | 80.3% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.69 | 63.0 | 6.11e-01 | 99.2% | 94.9% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.68 | 49.0 | 5.49e-01 | 91.9% | 96.8% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 53.0 | 5.71e-01 | 99.2% | 97.1% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.65 | 46.0 | 4.59e-01 | 93.5% | 71.2% |
| 2k4qA00 | 4.10.410.40 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › | 0.65 | 58.0 | 5.33e-01 | 96.0% | 89.1% |
| 1ylnA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.62 | 46.0 | 4.84e-01 | 100.0% | 85.1% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.61 | 46.0 | 4.67e-01 | 100.0% | 80.3% |
| 2gujA01 | 2.30.110.40 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Phage tail tube protein | 0.58 | 52.0 | 5.14e-01 | 100.0% | 94.7% |
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.58 | 53.0 | 4.72e-01 | 99.2% | 72.0% |
| 4wsqB00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.57 | 37.0 | 2.77e-01 | 98.4% | 26.1% |
| 2ptfA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 51.0 | 4.87e-01 | 100.0% | 83.7% |
| 3in6A02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 47.0 | 4.81e-01 | 98.4% | 96.6% |
| 2l25A00 | 3.30.2000.20 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.53 | 45.0 | 4.39e-01 | 94.4% | 92.9% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.53 | 47.0 | 3.96e-01 | 97.6% | 84.3% |
| 1g3pA02 | 3.90.450.1 | Alpha Beta › Alpha-Beta Complex › Minor Coat Protein; domain 2 › Minor Coat Protein; Domain 2 | 0.51 | 30.0 | 3.20e-01 | 79.8% | 67.3% |
| 3i4hX02 | 3.30.70.1900 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 32.0 | 3.49e-01 | 82.3% | 76.9% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2642579 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.90 | 86.0 | 8.45e-01 | 100.0% | 96.9% |
| 4157825 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.87 | 83.0 | 8.15e-01 | 100.0% | 98.5% |
| 2595159 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.86 | 82.0 | 7.28e-01 | 100.0% | 81.9% |
| 4888726 | 1.1.13.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tail_2 | 0.83 | 77.0 | 6.98e-01 | 100.0% | 84.1% |
| 5082881 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.82 | 76.0 | 7.64e-01 | 97.6% | 100.0% |
| 2471637 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.82 | 76.0 | 7.12e-01 | 100.0% | 93.3% |
| 2832217 | 1.1.5.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 | 0.79 | 73.0 | 6.96e-01 | 100.0% | 94.4% |
| 3096576 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.78 | 72.0 | 6.58e-01 | 100.0% | 88.7% |
| 4873215 | 1.1.13.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 | 0.78 | 71.0 | 6.87e-01 | 100.0% | 91.4% |
| 4514734 | 1.1.13.42 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Tail_tube | 0.77 | 65.0 | 6.85e-01 | 98.4% | 100.0% |
| 2101633 | 1.1.13.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_tube | 0.77 | 71.0 | 6.38e-01 | 100.0% | 77.2% |
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.77 | 62.0 | 6.70e-01 | 91.1% | 100.0% |
| 4957560 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.77 | 71.0 | 7.06e-01 | 100.0% | 99.2% |
| 3502370 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.76 | 71.0 | 6.45e-01 | 100.0% | 91.9% |
| 4988100 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.76 | 69.0 | 6.94e-01 | 97.6% | 99.2% |
| 4140243 | 1.1.5.82 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF2001 | 0.75 | 63.0 | 6.55e-01 | 100.0% | 95.7% |
| 3981654 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.74 | 61.0 | 6.43e-01 | 91.1% | 98.2% |
| 3590380 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 67.0 | 5.89e-01 | 100.0% | 84.4% |
| 4031285 | 1.1.13.64 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal | 0.71 | 50.0 | 5.75e-01 | 94.4% | 100.0% |
| 2468519 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 55.0 | 6.05e-01 | 93.5% | 100.0% |
| 4034209 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.70 | 61.0 | 6.01e-01 | 95.2% | 100.0% |
| 3965192 | 1.1.13.67 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2460 | 0.68 | 58.0 | 6.07e-01 | 91.1% | 100.0% |
| 1444177 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 61.0 | 5.96e-01 | 98.4% | 94.1% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 47.0 | 4.70e-01 | 92.7% | 69.6% |
| 4960006 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.68 | 53.0 | 5.56e-01 | 100.0% | 93.6% |
| 4033579 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.67 | 57.0 | 5.78e-01 | 91.9% | 100.0% |
| 1117606 | 1.1.13.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_N | 0.67 | 59.0 | 5.76e-01 | 96.0% | 100.0% |
| 5002750 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 54.0 | 5.81e-01 | 93.5% | 100.0% |
| 4888732 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.67 | 60.0 | 5.59e-01 | 99.2% | 83.3% |
| 3164699 | 1.1.13.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N | 0.67 | 56.0 | 5.85e-01 | 96.0% | 100.0% |
| 3059162 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.66 | 58.0 | 5.89e-01 | 96.0% | 97.6% |
| 4952430 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.64 | 49.0 | 5.21e-01 | 96.0% | 90.9% |
| 184986 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.64 | 57.0 | 5.71e-01 | 96.0% | 99.2% |
| 4888819 | 1.1.13.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_1 | 0.64 | 51.0 | 5.32e-01 | 96.0% | 93.7% |
| 4952429 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.64 | 49.0 | 5.32e-01 | 96.8% | 100.0% |
| 3964568 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.59 | 29.0 | 3.36e-01 | 96.8% | 63.5% |
| 4031205 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.59 | 54.0 | 4.59e-01 | 100.0% | 72.2% |
| 3111928 | 3114.1.1.3 ↗ | beta sandwiches › Mucin-binding protein domain › Mucin-binding protein domain › Mucin-binding protein domain › Muc_B2 | 0.57 | 29.0 | 3.19e-01 | 86.3% | 57.4% |
| 4444321 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.54 | 47.0 | 3.94e-01 | 94.4% | 80.5% |
| 4888780 | 304.124.1.5 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › T4-gp15_tss | 0.53 | 46.0 | 3.77e-01 | 96.0% | 79.5% |
| 4034130 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.53 | 40.0 | 4.38e-01 | 96.8% | 99.0% |
| 3382791 | 60.1.2.2 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C | 0.51 | 45.0 | 3.42e-01 | 98.4% | 61.3% |
| 3663962 | 60.1.2.1 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku | 0.51 | 44.0 | 3.42e-01 | 98.4% | 56.6% |