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IMGVR_UViG_3300028167_000246-3300028167-Ga0268285_10026699
Arc-VirIMGVR_UViG_3300028167_000246-3300028167-Ga0268285_10026699
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 85-209
Domain cluster:
rep: OR088901.1__WJZ27857.1__MOMMJLID_CDS0049__00049__D77-184
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02026.22 best | RyR | 40.6 | 3.60e-10 | 64.0% | 63.7% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nrtA00 | 6.20.350.10 | Special › Other non-globular › Actin; Chain A, domain 4 › | 0.72 | 49.0 | 5.72e-01 | 78.4% | 93.5% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.72 | 28.0 | 3.39e-01 | 99.2% | 52.9% |
| 1h99A01 | 1.10.1790.10 | Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain | 0.68 | 44.0 | 4.79e-01 | 95.2% | 77.9% |
| 3cymA03 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.68 | 41.0 | 4.78e-01 | 92.8% | 85.2% |
| 5mmjo00 | 1.10.287.10 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding | 0.65 | 30.0 | 3.79e-01 | 100.0% | 72.0% |
| 2c0kB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.64 | 51.0 | 4.84e-01 | 98.4% | 71.1% |
| 4f0uA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.62 | 45.0 | 4.13e-01 | 100.0% | 58.1% |
| 4x28C03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.62 | 32.0 | 3.06e-01 | 100.0% | 42.7% |
| 3cymA02 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.62 | 46.0 | 4.77e-01 | 100.0% | 82.4% |
| 1x3kA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.61 | 47.0 | 4.45e-01 | 96.0% | 68.0% |
| 1b8dA00 | 1.10.490.20 | Mainly Alpha › Orthogonal Bundle › Globin-like › Phycocyanins | 0.60 | 42.0 | 3.84e-01 | 100.0% | 54.3% |
| 6o0aA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.60 | 45.0 | 4.26e-01 | 100.0% | 65.8% |
| 4ertA01 | 1.10.490.160 | Mainly Alpha › Orthogonal Bundle › Globin-like › | 0.60 | 52.0 | 4.80e-01 | 96.0% | 89.0% |
| 1c0gA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.57 | 40.0 | 4.63e-01 | 100.0% | 100.0% |
| 2wiyA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.54 | 48.0 | 3.45e-01 | 100.0% | 68.5% |
| 5kbwB00 | 1.10.1760.20 | Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › | 0.52 | 45.0 | 4.13e-01 | 100.0% | 96.5% |
| 3ay8A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.50 | 31.0 | 3.03e-01 | 90.4% | 55.1% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4974222 | 3191.1.1.0 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs | 0.81 | 75.0 | 6.82e-01 | 98.4% | 96.2% |
| 4960350 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.74 | 67.0 | 6.24e-01 | 98.4% | 96.1% |
| 3729821 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.74 | 67.0 | 6.22e-01 | 98.4% | 91.6% |
| 4170809 | 108.1.1.73 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand › EF-hand_5+EF-hand_7 | 0.74 | 31.0 | 3.67e-01 | 100.0% | 55.6% |
| 400221 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.73 | 50.0 | 5.63e-01 | 78.4% | 87.9% |
| 3588063 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.71 | 45.0 | 4.87e-01 | 97.6% | 76.7% |
| 2526776 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.70 | 46.0 | 5.41e-01 | 95.2% | 92.3% |
| 4797697 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.69 | 61.0 | 5.19e-01 | 98.4% | 87.6% |
| 4486977 | 162.1.1.1 ↗ | alpha bundles › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PTS-regulatory domain, PRD › PRD | 0.68 | 43.0 | 4.39e-01 | 95.2% | 65.8% |
| 3960387 | 3191.1.1.0 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs | 0.65 | 57.0 | 5.13e-01 | 98.4% | 91.7% |
| 2671563 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.65 | 43.0 | 5.02e-01 | 95.2% | 91.3% |
| 3169912 | 150.5.1.114 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › PF29100 | 0.65 | 33.0 | 4.35e-01 | 100.0% | 88.6% |
| 3469367 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.64 | 30.0 | 2.99e-01 | 100.0% | 40.7% |
| 158724 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.64 | 51.0 | 4.83e-01 | 98.4% | 70.7% |
| 146969 | 3191.1.1.1 ↗ | alpha duplicates or obligate multimers › RyR motifs › RyR motifs › RyR motifs › RyR | 0.61 | 53.0 | 4.65e-01 | 96.0% | 89.9% |
| 3303 | 106.1.1.2 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Phycobilisome | 0.60 | 42.0 | 3.84e-01 | 100.0% | 54.3% |
| 4992431 | 3930.1.1.3 ↗ | alpha bundles › Helical bundle insertion in helicase domains › Helical bundle in Hef helicase › Helical bundle in Hef helicase › RNA_helicase_helical | 0.60 | 36.0 | 3.64e-01 | 96.8% | 58.4% |
| 3237808 | 5059.1.1.11 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TMEM144 | 0.56 | 48.0 | 3.65e-01 | 92.8% | 81.7% |
| 4486707 | 103.4.1.5 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › KIX_2 | 0.56 | 31.0 | 3.68e-01 | 92.8% | 78.8% |
| 3899929 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.56 | 49.0 | 3.83e-01 | 100.0% | 94.2% |
| 3682654 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.55 | 43.0 | 2.91e-01 | 84.0% | 78.8% |
| 3457105 | 601.4.1.44 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains › DUF3054 | 0.55 | 46.0 | 4.64e-01 | 98.4% | 93.6% |
| 5021445 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.52 | 43.0 | 4.52e-01 | 99.2% | 97.4% |
| 3794500 | 4.1.1.287 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5641 | 0.52 | 39.0 | 3.45e-01 | 100.0% | 54.1% |
| 3245021 | 110.1.1.0 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain | 0.51 | 34.0 | 3.92e-01 | 100.0% | 94.4% |
| 3507605 | 7022.1.1.1 ↗ | alpha bundles › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › central core domain of D-alanyl transfer protein › MBOAT | 0.51 | 27.0 | 2.69e-01 | 96.8% | 45.9% |
| 3192990 | 192.15.1.216 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › DUF7719 | 0.51 | 43.0 | 3.94e-01 | 96.8% | 69.1% |
| 3185012 | 131.1.1.1 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › PDEase_I | 0.51 | 37.0 | 3.00e-01 | 76.0% | 65.7% |
| 4047175 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 37.0 | 3.86e-01 | 86.4% | 85.2% |
D2
medium
residues 1-78