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IMGVR_UViG_3300028169_000045-3300028169-Ga0268279_100301011
Arc-VirIMGVR_UViG_3300028169_000045-3300028169-Ga0268279_100301011
Identity
- Kingdom:
- archaea
Quality
93.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-38
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01281.26 best | Ribosomal_L9_N | 24.2 | 2.70e-05 | 100.0% | 74.5% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4v19I01 | 3.40.5.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › Ribosomal protein L9, N-terminal domain | 0.95 | 85.0 | 7.19e-01 | 100.0% | 64.9% |
| 2hvfA00 | 3.40.5.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › Ribosomal protein L9, N-terminal domain | 0.95 | 85.0 | 7.45e-01 | 100.0% | 71.2% |
| 3anwB00 | 1.20.58.2050 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.94 | 83.0 | 5.21e-01 | 100.0% | 21.6% |
| 2hjqA01 | 3.40.5.20 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › YqbF domain | 0.78 | 61.0 | 5.87e-01 | 100.0% | 89.1% |
| 2hpuA02 | 3.30.70.2050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 44.0 | 3.95e-01 | 100.0% | 55.6% |
| 6ks6Q03 | 3.50.7.10 | Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL | 0.53 | 37.0 | 2.60e-01 | 80.6% | 75.0% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4025462 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 1.00 | 94.0 | 7.64e-01 | 100.0% | 60.0% |
| 3620761 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.99 | 92.0 | 6.31e-01 | 100.0% | 35.2% |
| 4084511 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.98 | 91.0 | 7.48e-01 | 100.0% | 61.7% |
| 4036040 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.98 | 91.0 | 7.70e-01 | 100.0% | 67.3% |
| 3958264 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.97 | 90.0 | 7.62e-01 | 100.0% | 67.3% |
| 3509141 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.97 | 89.0 | 6.13e-01 | 100.0% | 35.2% |
| 3601134 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.97 | 89.0 | 6.93e-01 | 100.0% | 54.3% |
| 5028408 | 4076.3.1.5 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › Gins51_C | 0.97 | 89.0 | 7.82e-01 | 100.0% | 92.0% |
| 4311108 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.96 | 89.0 | 7.09e-01 | 100.0% | 56.9% |
| 4068274 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.96 | 88.0 | 7.48e-01 | 100.0% | 67.3% |
| 4935547 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.96 | 88.0 | 7.78e-01 | 100.0% | 90.0% |
| 4981952 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.96 | 89.0 | 7.80e-01 | 100.0% | 86.0% |
| 4158800 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.96 | 87.0 | 7.41e-01 | 100.0% | 67.3% |
| 4932084 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.95 | 87.0 | 7.70e-01 | 100.0% | 90.0% |
| 4318792 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.95 | 86.0 | 6.59e-01 | 100.0% | 49.3% |
| 4939413 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.95 | 88.0 | 7.71e-01 | 100.0% | 96.0% |
| 5055750 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.94 | 86.0 | 7.64e-01 | 100.0% | 90.0% |
| 4956745 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.94 | 85.0 | 7.58e-01 | 100.0% | 90.0% |
| 3716713 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.94 | 85.0 | 7.55e-01 | 100.0% | 90.0% |
| 3788443 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.94 | 85.0 | 7.56e-01 | 100.0% | 74.0% |
| 4081421 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.94 | 86.0 | 7.61e-01 | 100.0% | 90.0% |
| 2718729 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.94 | 84.0 | 6.49e-01 | 100.0% | 50.0% |
| 3480487 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.93 | 83.0 | 5.99e-01 | 100.0% | 38.9% |
| 4220222 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.93 | 84.0 | 7.21e-01 | 100.0% | 65.5% |
| 4316117 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.93 | 84.0 | 7.21e-01 | 100.0% | 65.5% |
| 3835574 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.93 | 82.0 | 6.36e-01 | 100.0% | 49.3% |
| 4956454 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.92 | 82.0 | 7.08e-01 | 100.0% | 74.5% |
| 4932061 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.92 | 83.0 | 7.66e-01 | 100.0% | 95.6% |
| 4991671 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.91 | 81.0 | 7.22e-01 | 100.0% | 94.0% |
| 2641779 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.91 | 80.0 | 7.00e-01 | 100.0% | 69.8% |
| 4967982 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.91 | 80.0 | 7.52e-01 | 100.0% | 97.7% |
| 2617530 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.90 | 78.0 | 7.00e-01 | 100.0% | 72.5% |
| 4230268 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.90 | 77.0 | 7.18e-01 | 97.2% | 95.6% |
| 4269273 | 4076.4.1.1 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain › PriS_C | 0.89 | 77.0 | 7.20e-01 | 97.2% | 95.6% |
| 5063665 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.88 | 79.0 | 7.31e-01 | 100.0% | 93.3% |
| 5035097 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.88 | 79.0 | 7.33e-01 | 100.0% | 93.3% |
| 5010674 | 4076.3.1.11 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › PF25865 | 0.88 | 75.0 | 6.61e-01 | 100.0% | 70.9% |
| 4024535 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.88 | 77.0 | 6.67e-01 | 100.0% | 65.5% |
| 4169249 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.87 | 79.0 | 7.12e-01 | 100.0% | 89.6% |
| 2543054 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.87 | 75.0 | 5.84e-01 | 100.0% | 47.4% |
| 5001806 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.86 | 78.0 | 7.01e-01 | 100.0% | 87.5% |
| 2543111 | 4076.1.1.1 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like › Ribosomal_L9_N | 0.86 | 73.0 | 6.45e-01 | 100.0% | 68.5% |
| 5036149 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.84 | 74.0 | 6.93e-01 | 100.0% | 95.6% |
| 5068408 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.84 | 75.0 | 6.97e-01 | 100.0% | 93.3% |
| 4934987 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.84 | 73.0 | 6.76e-01 | 97.2% | 91.1% |
| 4536596 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.83 | 72.0 | 6.60e-01 | 100.0% | 89.6% |
| 4280403 | 4076.4.1.0 ↗ | a+b two layers › L9 N-domain-like › primase chain A, C-terminal domain › primase chain A, C-terminal domain | 0.83 | 71.0 | 6.62e-01 | 97.2% | 93.3% |
| 5000883 | 4076.3.1.0 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain | 0.82 | 70.0 | 6.37e-01 | 100.0% | 94.0% |