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IMGVR_UViG_3300028174_000197-3300028174-Ga0257123_100144037

Arc-Vir

IMGVR_UViG_3300028174_000197-3300028174-Ga0257123_100144037

Identity

Kingdom:
archaea

Quality

88.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-41
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ipeB02 3.30.230.80 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.79 67.0 4.32e-01 90.2% 35.2%
5xgbA03 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.72 56.0 3.42e-01 85.4% 14.5%
3e7wA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.66 39.0 2.84e-01 70.7% 20.7%
7r7eA01 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.64 43.0 3.09e-01 70.7% 22.7%
6zhhA01 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.61 44.0 2.90e-01 82.9% 17.8%
4iz6A02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.61 41.0 3.08e-01 70.7% 86.8%
6usmB01 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.57 49.0 3.31e-01 92.7% 36.1%
3q3vA01 3.40.50.1260 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate kinase, N-terminal domain 0.56 36.0 2.45e-01 90.2% 15.1%
7r7jB02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.55 40.0 2.79e-01 82.9% 84.9%
4dzdA02 3.30.70.1210 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 0.54 39.0 2.82e-01 78.0% 70.7%
ECOD (22)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3209226 2003.1.2.17 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.81 65.0 3.76e-01 90.2% 10.7%
3415404 3343.1.1.2 ↗ alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal 0.80 68.0 3.68e-01 92.7% 5.9%
2880851 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.78 63.0 4.38e-01 90.2% 27.8%
4943989 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.76 52.0 3.42e-01 82.9% 18.1%
3196146 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 62.0 4.32e-01 90.2% 31.5%
3598478 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.74 63.0 4.34e-01 92.7% 83.2%
4231345 140.1.1.11 ↗ alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1 0.73 54.0 3.41e-01 78.0% 15.8%
5069092 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.72 58.0 3.68e-01 87.8% 21.5%
5048633 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.72 55.0 3.72e-01 85.4% 22.5%
4169661 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.71 64.0 4.03e-01 100.0% 24.0%
4061047 101.1.10.3 ↗ alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.71 52.0 3.60e-01 87.8% 22.0%
3622196 604.1.1.63 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_SESTD1 0.70 63.0 4.45e-01 100.0% 98.3%
5028944 7512.1.1.62 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_trans_1_3 0.69 53.0 3.42e-01 85.4% 22.5%
5040427 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 46.0 3.54e-01 73.2% 29.1%
5024456 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.66 47.0 3.62e-01 78.0% 93.0%
4525128 2003.1.5.66 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.66 59.0 3.33e-01 100.0% 49.2%
3364361 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.58 43.0 3.05e-01 80.5% 88.8%
5021423 304.139.1.3 ↗ a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7/Csa2-related › Cas_Cas7 0.57 42.0 2.68e-01 87.8% 69.3%
3760585 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.53 37.0 2.92e-01 75.6% 78.0%
3626665 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.52 36.0 2.81e-01 73.2% 88.4%
3974097 327.5.1.2 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-binding_C 0.52 36.0 2.74e-01 78.0% 89.2%
4979006 327.5.1.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins 0.51 35.0 2.67e-01 73.2% 78.0%