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IMGVR_UViG_3300028175_000006-3300028175-Ga0257117_10003351
Arc-VirIMGVR_UViG_3300028175_000006-3300028175-Ga0257117_10003351
Identity
- Kingdom:
- archaea
Quality
74.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 11-66
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hc7A01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.60 | 42.0 | 2.70e-01 | 75.0% | 20.4% |
| 1bo7A00 | 3.30.572.10 | Alpha Beta › 2-Layer Sandwich › Thymidylate Synthase; Chain A › Thymidylate synthase/dCMP hydroxymethylase domain | 0.59 | 37.0 | 2.37e-01 | 73.2% | 11.4% |
| 1r8gA00 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.56 | 42.0 | 2.64e-01 | 83.9% | 94.6% |
| 1xtfA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.56 | 49.0 | 2.88e-01 | 94.6% | 54.3% |
| 3nnqA00 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.55 | 43.0 | 3.65e-01 | 87.5% | 84.2% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3616203 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.78 | 57.0 | 4.78e-01 | 91.1% | 46.3% |
| 4336659 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.71 | 50.0 | 5.61e-01 | 73.2% | 95.6% |
| 3410018 | 603.1.1.104 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › 7tm_7 | 0.68 | 49.0 | 3.02e-01 | 100.0% | 12.0% |
| 3999149 | 5051.1.1.6 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans | 0.65 | 48.0 | 2.81e-01 | 78.6% | 12.7% |
| 3222487 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.64 | 45.0 | 4.99e-01 | 73.2% | 93.3% |
| 3211557 | 5001.1.1.106 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str | 0.63 | 45.0 | 2.79e-01 | 98.2% | 12.5% |
| 1147340 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.63 | 56.0 | 5.48e-01 | 98.2% | 90.0% |
| 3175295 | 109.4.1.334 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › MNE1 | 0.62 | 47.0 | 2.98e-01 | 80.4% | 47.5% |
| 3222949 | 5001.1.1.106 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str | 0.62 | 44.0 | 2.77e-01 | 98.2% | 13.0% |
| 3693126 | 386.1.1.18 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz | 0.61 | 48.0 | 5.04e-01 | 83.9% | 98.0% |
| 3412402 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 43.0 | 3.40e-01 | 75.0% | 87.0% |
| 3176105 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.61 | 43.0 | 2.71e-01 | 75.0% | 52.4% |
| 3703629 | 386.1.1.18 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz | 0.59 | 42.0 | 4.76e-01 | 80.4% | 93.3% |
| 3902439 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 42.0 | 4.69e-01 | 78.6% | 93.3% |
| 4011434 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.59 | 46.0 | 3.93e-01 | 87.5% | 51.6% |
| 3742973 | 386.1.1.18 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz | 0.57 | 45.0 | 4.46e-01 | 87.5% | 81.7% |
| 3273140 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 38.0 | 3.77e-01 | 75.0% | 66.7% |
| 3965485 | 5084.5.3.1 ↗ | beta barrels › Outer membrane meander beta-barrels › Porins › Ligand-gated protein channel › TonB_dep_Rec_b-barrel | 0.55 | 38.0 | 2.15e-01 | 73.2% | 82.0% |
| 4965504 | 1076.1.1.1 ↗ | alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Rce1-like | 0.55 | 48.0 | 3.17e-01 | 96.4% | 100.0% |
| 3485009 | 386.1.1.24 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 | 0.54 | 43.0 | 4.04e-01 | 89.3% | 90.0% |
| 3577351 | 386.1.1.18 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_jaz | 0.53 | 40.0 | 4.39e-01 | 82.1% | 100.0% |
| 3853716 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 37.0 | 2.87e-01 | 78.6% | 69.6% |
| 4930300 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 33.0 | 2.78e-01 | 78.6% | 41.1% |