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IMGVR_UViG_3300028175_000008-3300028175-Ga0257117_100035114
Arc-VirIMGVR_UViG_3300028175_000008-3300028175-Ga0257117_100035114
Identity
- Kingdom:
- archaea
Quality
88.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-68
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5d8dD03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.64 | 52.0 | 5.27e-01 | 90.8% | 100.0% |
| 1qhoA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 49.0 | 4.16e-01 | 84.6% | 65.7% |
| 2i87A03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.62 | 50.0 | 4.82e-01 | 90.8% | 100.0% |
| 1imhC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 49.0 | 4.25e-01 | 92.3% | 82.1% |
| 2fb9A03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.59 | 44.0 | 4.59e-01 | 80.0% | 100.0% |
| 1vkzA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.59 | 47.0 | 4.65e-01 | 93.8% | 100.0% |
| 4dzgA00 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.58 | 48.0 | 4.15e-01 | 98.5% | 85.0% |
| 2pvpA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.58 | 46.0 | 4.64e-01 | 89.2% | 100.0% |
| 1auvA01 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.58 | 47.0 | 4.83e-01 | 92.3% | 100.0% |
| 3vpbA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.58 | 47.0 | 4.70e-01 | 95.4% | 100.0% |
| 6dgiA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.58 | 46.0 | 4.62e-01 | 93.8% | 100.0% |
| 3x17A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 46.0 | 3.98e-01 | 87.7% | 86.3% |
| 3k5iA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.57 | 46.0 | 4.59e-01 | 95.4% | 94.3% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.57 | 45.0 | 3.94e-01 | 90.8% | 93.4% |
| 3tqtA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.57 | 46.0 | 4.64e-01 | 96.9% | 100.0% |
| 4uzgA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 44.0 | 3.49e-01 | 90.8% | 64.7% |
| 5zctA02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.56 | 44.0 | 4.45e-01 | 90.8% | 100.0% |
| 2ee2A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 44.0 | 4.04e-01 | 87.7% | 87.4% |
| 1a9xA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.56 | 45.0 | 4.45e-01 | 95.4% | 98.6% |
| 2lfeA00 | 2.60.40.2840 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 43.0 | 3.84e-01 | 92.3% | 82.1% |
| 6fzvD01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.55 | 42.0 | 3.55e-01 | 86.2% | 82.2% |
| 1gsaA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.55 | 42.0 | 4.30e-01 | 89.2% | 100.0% |
| 1wzlA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 3.56e-01 | 87.7% | 80.2% |
| 4yhbA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 44.0 | 3.70e-01 | 96.9% | 91.5% |
| 4wd3A02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.54 | 44.0 | 4.26e-01 | 96.9% | 96.0% |
| 3orqA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.54 | 41.0 | 4.16e-01 | 90.8% | 100.0% |
| 3rbgD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.55e-01 | 84.6% | 79.6% |
| 6udkD00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 3.49e-01 | 92.3% | 89.2% |
| 5t17A00 | 3.30.1340.10 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like | 0.52 | 44.0 | 4.06e-01 | 96.9% | 81.2% |
| 7y8sA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 41.0 | 3.71e-01 | 90.8% | 89.5% |
| 1a45A01 | 2.60.20.10 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins | 0.52 | 40.0 | 3.83e-01 | 90.8% | 100.0% |
| 3g7dA03 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 39.0 | 3.27e-01 | 86.2% | 76.6% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.51 | 40.0 | 3.61e-01 | 95.4% | 92.3% |
| 3s9dD01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 41.0 | 3.65e-01 | 90.8% | 82.3% |
| 2o8rB02 | 3.30.1840.10 | Alpha Beta › 2-Layer Sandwich › polyphosphate kinase like › Polyphosphate kinase middle domain | 0.51 | 38.0 | 2.99e-01 | 84.6% | 77.4% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4286279 | 206.1.3.55 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › TTL, ATPgrasp_YheCD | 0.66 | 56.0 | 3.48e-01 | 95.4% | 40.5% |
| 3719247 | 206.1.3.12 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › TTL | 0.64 | 54.0 | 3.39e-01 | 96.9% | 20.4% |
| 4924545 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.64 | 54.0 | 4.22e-01 | 95.4% | 54.2% |
| 3688359 | 206.1.3.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › CPSase_L_D2 | 0.64 | 53.0 | 3.66e-01 | 95.4% | 47.3% |
| 3599208 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.63 | 53.0 | 3.38e-01 | 95.4% | 21.4% |
| 4953358 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.63 | 51.0 | 3.58e-01 | 95.4% | 33.5% |
| 4192663 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.63 | 53.0 | 3.68e-01 | 95.4% | 65.8% |
| 5073504 | 206.1.3.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp_3 | 0.63 | 53.0 | 3.30e-01 | 96.9% | 36.9% |
| 3907143 | 206.1.3.12 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › TTL | 0.63 | 53.0 | 3.40e-01 | 96.9% | 22.4% |
| 3621762 | 206.1.3.12 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › TTL | 0.62 | 53.0 | 3.27e-01 | 96.9% | 19.5% |
| None | — | 0.62 | 53.0 | 3.55e-01 | 96.9% | 30.2% | |
| None | — | 0.62 | 51.0 | 3.71e-01 | 95.4% | 37.5% | |
| 4928392 | 206.1.3.7 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATP-grasp | 0.61 | 51.0 | 3.26e-01 | 95.4% | 19.7% |
| 4455503 | 11.1.1.232 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › SKICH | 0.61 | 50.0 | 4.01e-01 | 92.3% | 68.9% |
| 5028433 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.61 | 51.0 | 3.73e-01 | 95.4% | 35.7% |
| 4269579 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.61 | 51.0 | 3.40e-01 | 95.4% | 21.8% |
| 3250384 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.61 | 51.0 | 3.83e-01 | 100.0% | 55.6% |
| 3601622 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.60 | 50.0 | 3.13e-01 | 95.4% | 19.6% |
| 3970644 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.60 | 50.0 | 3.44e-01 | 98.5% | 75.0% |
| 5036063 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.60 | 49.0 | 3.65e-01 | 95.4% | 76.1% |
| 3799969 | 206.1.3.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Synapsin_C | 0.58 | 48.0 | 3.44e-01 | 95.4% | 32.4% |
| 5011065 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.58 | 48.0 | 3.51e-01 | 98.5% | 65.9% |
| 4441337 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.57 | 48.0 | 3.50e-01 | 100.0% | 72.4% |
| 5046503 | 206.1.3.21 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › RimK | 0.57 | 47.0 | 3.50e-01 | 98.5% | 69.5% |
| 4000776 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.57 | 42.0 | 3.63e-01 | 84.6% | 84.3% |
| 4600663 | 206.1.3.19 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › Dala_Dala_lig_C | 0.56 | 47.0 | 3.35e-01 | 96.9% | 30.0% |
| 3273150 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.56 | 45.0 | 4.01e-01 | 92.3% | 85.0% |
| 3477514 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.56 | 46.0 | 3.96e-01 | 98.5% | 77.4% |
| 3936478 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.56 | 43.0 | 3.72e-01 | 87.7% | 84.5% |
| 3933224 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.55 | 42.0 | 3.61e-01 | 87.7% | 86.1% |
| 3997045 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.54 | 42.0 | 3.84e-01 | 89.2% | 100.0% |
| 4280213 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.54 | 44.0 | 3.85e-01 | 96.9% | 87.3% |
| 4486768 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.54 | 45.0 | 3.92e-01 | 100.0% | 91.8% |
| 4001690 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.54 | 41.0 | 3.52e-01 | 86.2% | 77.4% |
| 3954168 | 206.1.3.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp | 0.54 | 44.0 | 3.14e-01 | 98.5% | 64.2% |
| 3662726 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.54 | 44.0 | 3.79e-01 | 96.9% | 84.3% |
| 4097380 | 325.1.1.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › CO dehydrogenase molybdoprotein N-domain-like › GARS_C | 0.54 | 41.0 | 3.22e-01 | 87.7% | 40.6% |
| 3225104 | 10.4.1.21 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › DUF7591 | 0.54 | 44.0 | 3.88e-01 | 96.9% | 86.7% |
| 3837973 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.54 | 44.0 | 3.73e-01 | 98.5% | 83.2% |
| 3193786 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.54 | 43.0 | 3.51e-01 | 95.4% | 95.7% |
| 5058841 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 39.0 | 3.40e-01 | 83.1% | 82.6% |
| 4107956 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.53 | 43.0 | 3.71e-01 | 98.5% | 84.2% |
| 3994744 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.53 | 41.0 | 3.51e-01 | 89.2% | 88.3% |
| 4428238 | 1.1.8.20 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_CAF17_C | 0.53 | 44.0 | 3.71e-01 | 100.0% | 94.4% |
| 4929314 | 1137.1.1.1 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain › TP_methylase | 0.53 | 44.0 | 3.81e-01 | 98.5% | 91.8% |
| 3542617 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.53 | 41.0 | 3.48e-01 | 89.2% | 83.3% |
| 5012955 | 1.1.7.128 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF515 | 0.53 | 40.0 | 3.77e-01 | 86.2% | 87.1% |
| 3226027 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.53 | 42.0 | 3.72e-01 | 93.8% | 88.6% |
| 5459 | 4114.1.1.1 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like › PP_kinase | 0.52 | 37.0 | 3.10e-01 | 80.0% | 91.5% |
| 3899364 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 41.0 | 3.53e-01 | 90.8% | 86.4% |
| 3442940 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.51 | 38.0 | 3.35e-01 | 83.1% | 84.8% |
| 3875827 | 10.4.1.1 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain › CUB | 0.51 | 40.0 | 3.40e-01 | 95.4% | 59.2% |
| 3987360 | 206.1.3.84 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › R2K_2 | 0.51 | 42.0 | 3.23e-01 | 100.0% | 71.2% |
| 3917383 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.51 | 39.0 | 3.65e-01 | 92.3% | 86.7% |
| 3400205 | 10.4.1.0 ↗ | beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain | 0.50 | 43.0 | 3.40e-01 | 100.0% | 55.9% |