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IMGVR_UViG_3300028175_000686-3300028175-Ga0257117_10031372
Arc-VirIMGVR_UViG_3300028175_000686-3300028175-Ga0257117_10031372
Identity
- Kingdom:
- archaea
Quality
93.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-102_110-115
Domain cluster:
rep: NC_027299.1__YP_009146220.1__SUFP_046__00046__D4-101
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10544.16 best | T5orf172 | 60.4 | 2.90e-16 | 82.9% | 98.0% |
| PF13455.13 | MUG113 | 55.5 | 9.70e-15 | 69.5% | 98.6% |
D2
high
residues 122-200
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gt2A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.73 | 45.0 | 3.74e-01 | 86.1% | 37.0% |
| 1oqjA00 | 3.10.390.10 | Alpha Beta › Roll › SAND domain › SAND domain-like | 0.70 | 59.0 | 5.63e-01 | 91.1% | 83.3% |
| 2p84A02 | 2.30.30.290 | Mainly Beta › Roll › SH3 type barrels. › YopX-like domains | 0.60 | 41.0 | 4.31e-01 | 81.0% | 78.1% |
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 41.0 | 4.47e-01 | 82.3% | 90.5% |
| 3t05A02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.58 | 41.0 | 3.83e-01 | 96.2% | 59.8% |
| 4m0wA03 | 2.60.120.1680 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 36.0 | 3.03e-01 | 84.8% | 36.5% |
| 6c6sD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 39.0 | 4.35e-01 | 79.7% | 95.0% |
| 2vseA03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.56 | 42.0 | 3.55e-01 | 82.3% | 97.9% |
| 4g6iB01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.56 | 39.0 | 3.82e-01 | 84.8% | 66.3% |
| 3ceyB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 45.0 | 3.77e-01 | 100.0% | 85.1% |
| 3fppA01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.50 | 39.0 | 3.55e-01 | 83.5% | 68.3% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5024805 | 4.2.1.3 ↗ | beta barrels › SH3 › SAND › SAND › RAMA | 0.82 | 76.0 | 7.58e-01 | 98.7% | 100.0% |
| 3570978 | 4.2.1.3 ↗ | beta barrels › SH3 › SAND › SAND › RAMA | 0.82 | 75.0 | 7.16e-01 | 100.0% | 97.8% |
| 3569959 | 4.2.1.10 ↗ | beta barrels › SH3 › SAND › SAND › IRF-2BP1_2_M | 0.81 | 74.0 | 5.83e-01 | 98.7% | 73.5% |
| 3898777 | 4.1.1.327 ↗ | beta barrels › SH3 › SH3 › SH3 › IRF-2BP1_2_M | 0.80 | 74.0 | 5.82e-01 | 100.0% | 72.9% |
| 3840072 | 4.2.1.0 ↗ | beta barrels › SH3 › SAND › SAND | 0.80 | 72.0 | 7.08e-01 | 97.5% | 94.1% |
| 3959495 | 219.1.1.8 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › NLPC_P60 | 0.74 | 48.0 | 4.90e-01 | 81.0% | 67.9% |
| 3839849 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.69 | 43.0 | 4.64e-01 | 82.3% | 75.4% |
| 3964846 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.66 | 40.0 | 3.97e-01 | 79.7% | 57.6% |
| 4116921 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.64 | 40.0 | 4.46e-01 | 82.3% | 81.7% |
| 4662947 | 4.1.1.297 ↗ | beta barrels › SH3 › SH3 › SH3 › YajC | 0.64 | 40.0 | 4.30e-01 | 82.3% | 75.4% |
| 4343266 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.62 | 33.0 | 4.01e-01 | 84.8% | 82.0% |
| 3166323 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 41.0 | 4.39e-01 | 83.5% | 81.4% |
| 2427475 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 39.0 | 4.18e-01 | 81.0% | 80.6% |
| 3831450 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.57 | 44.0 | 4.24e-01 | 82.3% | 86.7% |
| 3954938 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 41.0 | 4.47e-01 | 82.3% | 93.8% |
| 4942589 | 4.1.1.139 ↗ | beta barrels › SH3 › SH3 › SH3 › IF5A-like_N | 0.55 | 39.0 | 4.12e-01 | 93.7% | 84.3% |
| 3390533 | 4.8.1.19 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › WAC_Acf1_DNA_bd | 0.54 | 42.0 | 3.31e-01 | 82.3% | 45.6% |
| 3391203 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.52 | 31.0 | 3.35e-01 | 83.5% | 70.8% |
| 3921963 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.52 | 40.0 | 3.36e-01 | 83.5% | 96.3% |
| 3451280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.51 | 42.0 | 3.36e-01 | 94.9% | 45.8% |