←Back to structures

IMGVR_UViG_3300028177_000119-3300028177-Ga0257122_100322210

Arc-Vir

Identity

Accession:: IMGVR_UViG_3300028177_000119-3300028177-Ga0257122_100322210 ↗
Kingdom:: archaea

Quality

65.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-40

PDB

Domain cluster: representative

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1u0tB01	3.40.50.10330	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1	0.65	48.0	3.45e-01	100.0%	25.2%
4gieA00	3.20.20.100	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain	0.62	48.0	2.93e-01	100.0%	12.5%
1cvrA01	3.40.50.10390	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Gingipain r; domain 1	0.62	45.0	3.35e-01	100.0%	27.4%
5z6bA01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.59	46.0	3.10e-01	100.0%	20.5%
2fa8B00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.59	46.0	3.78e-01	100.0%	43.7%
5ci5A01	3.40.190.10	Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II	0.56	43.0	2.88e-01	100.0%	19.6%
2j49A00	1.25.40.500	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › TFIID subunit TAF5, NTD2 domain	0.55	42.0	3.09e-01	97.4%	32.8%
1vw4400	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.55	45.0	3.18e-01	100.0%	29.7%
4akgA15	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.55	39.0	2.93e-01	100.0%	25.8%
2oqrA01	3.40.50.2300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator	0.53	38.0	3.25e-01	100.0%	41.2%
3l23A00	3.20.20.150	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes	0.53	41.0	2.59e-01	100.0%	18.1%
1gp1A00	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.53	42.0	2.84e-01	100.0%	68.5%
2g95B02	3.20.20.70	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I	0.51	39.0	2.50e-01	100.0%	15.4%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3278307	2008.1.1.0 ↗	a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like	0.62	50.0	3.47e-01	100.0%	26.2%
3959448	2007.1.1.10 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › GATase_3	0.61	49.0	3.50e-01	100.0%	30.0%
4964054	2485.1.1.34 ↗	a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rdx	0.60	49.0	4.13e-01	100.0%	50.7%
3968001	7523.1.1.15 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › LysR_substrate	0.58	41.0	2.74e-01	94.7%	16.5%
5063253	7523.1.1.8 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1	0.55	41.0	2.69e-01	89.5%	18.0%
4409943	7523.1.1.0 ↗	a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II	0.54	42.0	3.55e-01	97.4%	82.7%
3796501	2485.1.1.2 ↗	a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GSHPx	0.52	42.0	3.28e-01	100.0%	39.0%