←Back to structures
IMGVR_UViG_3300028189_000067-3300028189-Ga0257127_100108212
Arc-VirIMGVR_UViG_3300028189_000067-3300028189-Ga0257127_100108212
Identity
- Kingdom:
- archaea
Quality
65.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 17-85
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yhsA01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.61 | 49.0 | 4.44e-01 | 91.3% | 90.7% |
| 1oqcA00 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.56 | 42.0 | 3.65e-01 | 82.6% | 88.4% |
| 2ze7A02 | 1.10.287.890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain | 0.54 | 42.0 | 3.81e-01 | 88.4% | 83.3% |
| 3of4A00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.51 | 39.0 | 2.88e-01 | 87.0% | 64.3% |
| 1lm4A00 | 3.90.45.10 | Alpha Beta › Alpha-Beta Complex › Peptide Deformylase › Peptide deformylase | 0.50 | 31.0 | 2.31e-01 | 91.3% | 22.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3657221 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.64 | 44.0 | 4.42e-01 | 72.5% | 95.7% |
| 4547531 | 308.1.1.0 ↗ | a+b two layers › ClpS-like › ClpS-related › ClpS-related | 0.57 | 49.0 | 4.59e-01 | 97.1% | 89.4% |
| 3826026 | 109.4.1.1336 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3 | 0.50 | 36.0 | 2.73e-01 | 79.7% | 45.5% |
| 3469440 | 109.4.1.1424 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR_1, PPR_2, PPR_3, TPR_24 | 0.50 | 36.0 | 2.71e-01 | 79.7% | 66.3% |