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IMGVR_UViG_3300028189_000067-3300028189-Ga0257127_100108234
Arc-VirIMGVR_UViG_3300028189_000067-3300028189-Ga0257127_100108234
Identity
- Kingdom:
- archaea
Quality
80.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 182-474
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4rkrB01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.78 | 29.0 | 4.37e-01 | 100.0% | 76.9% |
| 1shuX00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.78 | 45.0 | 5.66e-01 | 100.0% | 91.2% |
| 1atzB00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.77 | 45.0 | 5.67e-01 | 100.0% | 90.5% |
| 7xlqD02 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.76 | 45.0 | 5.56e-01 | 100.0% | 89.5% |
| 1jeyA01 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.75 | 51.0 | 6.05e-01 | 100.0% | 96.6% |
| 3gbvA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.74 | 31.0 | 4.50e-01 | 100.0% | 81.4% |
| 3lftA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 31.0 | 4.30e-01 | 100.0% | 83.2% |
| 2iueA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.68 | 46.0 | 5.34e-01 | 100.0% | 93.4% |
| 7zs9401 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.63 | 46.0 | 5.29e-01 | 99.7% | 97.3% |
| 2qipA00 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.62 | 34.0 | 4.62e-01 | 100.0% | 98.1% |
| 7e6iA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 38.0 | 4.81e-01 | 98.0% | 100.0% |
| 5enzA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.62 | 29.0 | 3.84e-01 | 100.0% | 78.9% |
| 1dzfA01 | 3.40.1340.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna-directed Rna Polymerases I, Ii, And Iii 27 Kd Polypeptide; Chain: A; domain 1 › RNA polymerase, Rpb5, N-terminal domain | 0.62 | 30.0 | 4.32e-01 | 95.6% | 97.8% |
| 2nutB04 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.62 | 47.0 | 5.22e-01 | 100.0% | 96.2% |
| 2rbgA00 | 3.40.50.11100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 28.0 | 4.15e-01 | 97.3% | 100.0% |
| 3htvA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 24.0 | 3.86e-01 | 80.9% | 98.2% |
| 5nckA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 23.0 | 3.81e-01 | 80.5% | 99.0% |
| 1xo1A02 | 3.40.50.1010 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease | 0.58 | 28.0 | 3.76e-01 | 95.6% | 83.6% |
| 3fcsB03 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.58 | 44.0 | 4.85e-01 | 100.0% | 94.7% |
| 4nesA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.57 | 28.0 | 3.63e-01 | 100.0% | 79.8% |
| 5aj3K00 | 3.30.420.80 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 | 0.57 | 24.0 | 3.39e-01 | 99.7% | 80.1% |
| 1ispA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 32.0 | 4.02e-01 | 100.0% | 89.9% |
| 4zrmA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 35.0 | 4.18e-01 | 99.7% | 89.6% |
| 2c20A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 34.0 | 4.07e-01 | 99.7% | 87.7% |
| 2pk3A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 34.0 | 3.91e-01 | 99.3% | 81.3% |
| 2gi4A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 28.0 | 3.67e-01 | 99.7% | 91.7% |
| 1u2pA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 28.0 | 3.63e-01 | 99.3% | 90.4% |
| 3u7eB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 28.0 | 3.44e-01 | 99.3% | 79.3% |
| 6hcdD00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 25.0 | 3.52e-01 | 99.3% | 94.1% |
| 3ld9A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 33.0 | 3.98e-01 | 100.0% | 96.3% |
| 3wxmB02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.51 | 23.0 | 3.44e-01 | 95.9% | 96.7% |
| 5hciC00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 38.0 | 4.14e-01 | 99.7% | 91.5% |
| 8gr2A01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.50 | 33.0 | 3.89e-01 | 99.7% | 95.9% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4927526 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.83 | 47.0 | 5.32e-01 | 100.0% | 70.1% |
| 3602816 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.81 | 46.0 | 5.21e-01 | 100.0% | 71.2% |
| None | — | 0.81 | 42.0 | 5.76e-01 | 94.2% | 94.8% | |
| 3604315 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.80 | 43.0 | 5.22e-01 | 100.0% | 76.5% |
| 5010754 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.80 | 44.0 | 5.53e-01 | 100.0% | 83.7% |
| 4944900 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.80 | 47.0 | 5.49e-01 | 97.3% | 79.5% |
| 4936416 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.79 | 49.0 | 5.38e-01 | 100.0% | 73.7% |
| 5039945 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.79 | 45.0 | 5.51e-01 | 100.0% | 84.1% |
| 3919472 | 2006.1.6.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 | 0.78 | 45.0 | 5.73e-01 | 100.0% | 91.7% |
| 3852148 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.78 | 46.0 | 5.45e-01 | 100.0% | 82.4% |
| 5062145 | 11.1.1.1411 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › VWA_3 | 0.78 | 45.0 | 4.67e-01 | 100.0% | 60.4% |
| 3557980 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.78 | 47.0 | 5.82e-01 | 100.0% | 90.8% |
| 5018862 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.78 | 45.0 | 5.53e-01 | 100.0% | 85.6% |
| 3270858 | 2006.1.6.13 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_3 | 0.78 | 46.0 | 5.73e-01 | 100.0% | 91.9% |
| 3531630 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 47.0 | 5.78e-01 | 100.0% | 90.8% |
| 4971996 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.77 | 49.0 | 5.75e-01 | 100.0% | 87.6% |
| 4958434 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.77 | 46.0 | 5.56e-01 | 100.0% | 86.5% |
| 5078558 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 39.0 | 5.57e-01 | 96.6% | 100.0% |
| 3550568 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 45.0 | 5.01e-01 | 100.0% | 72.3% |
| 3509414 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 44.0 | 5.40e-01 | 100.0% | 86.2% |
| 3927494 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.76 | 44.0 | 5.29e-01 | 99.0% | 83.5% |
| 3232573 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.75 | 49.0 | 5.78e-01 | 100.0% | 91.7% |
| 3440234 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.75 | 47.0 | 5.21e-01 | 100.0% | 76.6% |
| 3226298 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.75 | 46.0 | 5.32e-01 | 100.0% | 81.4% |
| 5021666 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.75 | 46.0 | 5.64e-01 | 100.0% | 91.8% |
| 4179809 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.74 | 35.0 | 4.86e-01 | 100.0% | 87.3% |
| 3389620 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.72 | 46.0 | 5.37e-01 | 100.0% | 86.5% |
| 4945636 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.72 | 45.0 | 5.36e-01 | 100.0% | 90.0% |
| 5049407 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.72 | 48.0 | 5.75e-01 | 100.0% | 96.6% |
| 3396844 | 2006.1.6.4 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Ku_N | 0.71 | 49.0 | 5.73e-01 | 97.6% | 96.2% |
| 3265260 | 2006.1.6.41 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › vWA_SIBA-E | 0.71 | 43.0 | 5.07e-01 | 100.0% | 84.9% |
| 5073395 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.70 | 47.0 | 5.64e-01 | 100.0% | 96.1% |
| 3667603 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.69 | 43.0 | 5.28e-01 | 97.3% | 94.2% |
| 5048176 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.69 | 51.0 | 5.53e-01 | 99.0% | 87.4% |
| 4983536 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.68 | 50.0 | 5.48e-01 | 100.0% | 89.6% |
| 3227080 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.68 | 42.0 | 4.96e-01 | 100.0% | 88.0% |
| 5072653 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.68 | 42.0 | 5.05e-01 | 100.0% | 90.8% |
| None | — | 0.67 | 47.0 | 5.41e-01 | 100.0% | 94.1% | |
| 3249751 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.67 | 45.0 | 4.69e-01 | 100.0% | 72.6% |
| 3613044 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.66 | 49.0 | 5.58e-01 | 100.0% | 97.8% |
| 3674873 | 2006.1.6.12 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_2 | 0.66 | 47.0 | 5.51e-01 | 100.0% | 100.0% |
| 3220827 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.66 | 41.0 | 4.90e-01 | 100.0% | 91.3% |
| 3727336 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.64 | 46.0 | 4.79e-01 | 100.0% | 75.7% |
| 5079404 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.64 | 43.0 | 5.08e-01 | 100.0% | 94.3% |
| 5046274 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.64 | 43.0 | 5.05e-01 | 99.7% | 95.1% |
| 3232571 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.64 | 44.0 | 4.83e-01 | 100.0% | 84.2% |
| 3960263 | 2007.1.20.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Dehydratase-like › ILVD_EDD | 0.62 | 27.0 | 3.61e-01 | 82.9% | 73.4% |
| 3219961 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.61 | 26.0 | 3.74e-01 | 98.3% | 83.0% |
| 5074364 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.61 | 48.0 | 5.21e-01 | 100.0% | 95.9% |
| 3191387 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.60 | 45.0 | 4.43e-01 | 100.0% | 69.7% |
| 3648487 | 2006.1.6.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Sec23_trunk | 0.59 | 50.0 | 5.23e-01 | 100.0% | 95.8% |
| 4874143 | 2006.1.6.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Integrin_beta | 0.59 | 45.0 | 4.87e-01 | 100.0% | 91.9% |
| 2531242 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.59 | 45.0 | 4.02e-01 | 100.0% | 57.2% |
| 4961978 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.57 | 29.0 | 4.05e-01 | 97.3% | 100.0% |
| 4943310 | 2484.1.1.7 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_S11 | 0.57 | 24.0 | 3.63e-01 | 99.0% | 89.6% |
| 3266779 | 2006.1.6.33 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA_4 | 0.57 | 41.0 | 4.51e-01 | 95.9% | 88.2% |
| 4932648 | 2484.1.1.7 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_S11 | 0.56 | 25.0 | 3.33e-01 | 99.0% | 75.3% |
| 3598809 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 24.0 | 3.52e-01 | 99.3% | 86.9% |
| 3643512 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.54 | 34.0 | 3.89e-01 | 93.2% | 83.8% |
| 3707625 | 2006.1.6.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Sec23_trunk | 0.54 | 46.0 | 4.77e-01 | 100.0% | 94.6% |
| 4634374 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.53 | 22.0 | 3.43e-01 | 95.6% | 94.2% |
| 3427464 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.51 | 23.0 | 3.32e-01 | 91.8% | 92.0% |
| 3257638 | 2006.1.6.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Sec23_trunk | 0.51 | 48.0 | 4.71e-01 | 100.0% | 95.8% |
D2
medium
residues 73-181
Domain cluster:
representative
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3998932 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.74 | 37.0 | 3.12e-01 | 89.9% | 31.2% |
| 3268551 | 5054.1.1.71 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › PTPLA | 0.58 | 40.0 | 3.20e-01 | 70.6% | 96.3% |