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IMGVR_UViG_3300028191_000374-3300028191-Ga0265595_100242718
Arc-VirIMGVR_UViG_3300028191_000374-3300028191-Ga0265595_100242718
Identity
- Kingdom:
- archaea
Quality
46.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 22-173
D2
medium
residues 222-244_258-310
D3
medium
residues 423-520
Domain cluster:
rep: ALT_07252016_14_scaffold_0_prodigal-single.1__X__X__00375__D233-318
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v0fB03 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.69 | 56.0 | 5.94e-01 | 94.9% | 100.0% |
| 2zzeA03 | 2.40.30.130 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.67 | 49.0 | 4.99e-01 | 92.9% | 76.5% |
| 2qggA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.65 | 55.0 | 5.69e-01 | 98.0% | 97.8% |
| 2f1lA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.63 | 51.0 | 5.35e-01 | 93.9% | 96.6% |
| 1fx0B01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.63 | 48.0 | 5.23e-01 | 89.8% | 100.0% |
| 6f2mA02 | 2.40.30.290 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.60 | 48.0 | 5.06e-01 | 93.9% | 97.7% |
| 4b3fX02 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.60 | 52.0 | 5.22e-01 | 92.9% | 100.0% |
| 2cw5A02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.59 | 46.0 | 4.82e-01 | 89.8% | 93.3% |
| 3op1A02 | 2.40.30.30 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like | 0.58 | 51.0 | 4.92e-01 | 95.9% | 100.0% |
| 3fvqA03 | 2.40.50.470 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 32.0 | 3.88e-01 | 96.9% | 87.9% |
| 3b5mA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 40.0 | 3.76e-01 | 71.4% | 86.6% |
| 2dpyA00 | 3.40.50.12240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 49.0 | 3.24e-01 | 94.9% | 24.9% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 41.0 | 3.59e-01 | 94.9% | 49.0% |
| 2ws9100 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 48.0 | 3.64e-01 | 94.9% | 75.2% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 37.0 | 4.30e-01 | 95.9% | 100.0% |
| 5z06B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 4.09e-01 | 92.9% | 78.3% |
| 1xqbA01 | 2.40.30.70 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YaeB-like | 0.56 | 48.0 | 4.64e-01 | 93.9% | 88.1% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.56 | 44.0 | 4.37e-01 | 96.9% | 81.7% |
| 4dohB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 4.15e-01 | 95.9% | 85.2% |
| 2l3rA02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.55 | 38.0 | 4.28e-01 | 91.8% | 97.3% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.55 | 44.0 | 4.02e-01 | 98.0% | 64.5% |
| 1n12A00 | 2.60.40.1090 | Mainly Beta › Sandwich › Immunoglobulin-like › Fimbrial-type adhesion domain | 0.54 | 44.0 | 4.02e-01 | 91.8% | 100.0% |
| 2ekjA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 39.0 | 3.91e-01 | 95.9% | 74.3% |
| 1tdqA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 4.10e-01 | 94.9% | 87.8% |
| 6i6rB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 41.0 | 4.10e-01 | 98.0% | 82.8% |
| 1a21A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 4.00e-01 | 95.9% | 79.6% |
| 3r8qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 39.0 | 4.08e-01 | 98.0% | 87.8% |
| 4zxeC00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 44.0 | 4.03e-01 | 95.9% | 100.0% |
| 5jipA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.99e-01 | 98.0% | 85.6% |
| 3s98A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 4.08e-01 | 95.9% | 88.2% |
| 1fnfA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 40.0 | 4.07e-01 | 96.9% | 87.2% |
| 2e8yA01 | 2.60.40.2320 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 37.0 | 3.72e-01 | 89.8% | 73.3% |
| 4llfD02 | 2.60.40.4030 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 44.0 | 4.15e-01 | 96.9% | 95.0% |
| 1sixA00 | 2.70.40.10 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) | 0.51 | 43.0 | 3.78e-01 | 94.9% | 77.8% |
| 1yy3A02 | 2.40.10.240 | Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like | 0.51 | 40.0 | 4.01e-01 | 91.8% | 82.8% |
| 3t1wA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.91e-01 | 98.0% | 84.8% |
| 2mizA00 | 2.60.40.2900 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 45.0 | 3.88e-01 | 99.0% | 84.0% |
| 3brnB00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 38.0 | 3.35e-01 | 78.6% | 92.6% |
| 3v6oB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 40.0 | 4.03e-01 | 94.9% | 85.0% |
| 3pdgA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 36.0 | 3.77e-01 | 95.9% | 82.4% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4162532 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.69 | 50.0 | 5.54e-01 | 93.9% | 98.7% |
| 4403870 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.68 | 50.0 | 5.07e-01 | 94.9% | 78.9% |
| 4976800 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.67 | 50.0 | 5.27e-01 | 92.9% | 85.6% |
| 4338601 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.67 | 48.0 | 5.02e-01 | 93.9% | 82.2% |
| 3975132 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 49.0 | 5.09e-01 | 98.0% | 83.3% |
| 4197108 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.67 | 49.0 | 5.11e-01 | 94.9% | 84.4% |
| 4194551 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.67 | 48.0 | 5.27e-01 | 93.9% | 97.3% |
| 3278698 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 47.0 | 4.60e-01 | 72.4% | 91.4% |
| 3370389 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 43.0 | 5.12e-01 | 70.4% | 100.0% |
| 4197746 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.66 | 48.0 | 5.14e-01 | 95.9% | 89.4% |
| 4401809 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.66 | 56.0 | 5.82e-01 | 96.9% | 100.0% |
| 3171334 | 1.1.7.102 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF28793 | 0.66 | 57.0 | 5.47e-01 | 93.9% | 100.0% |
| 3741921 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.65 | 57.0 | 5.63e-01 | 94.9% | 100.0% |
| 1790393 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.65 | 51.0 | 5.47e-01 | 96.9% | 98.8% |
| 4452870 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.65 | 53.0 | 5.55e-01 | 92.9% | 96.7% |
| 4966046 | 1.1.8.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GCV_T_C | 0.65 | 39.0 | 4.16e-01 | 78.6% | 69.4% |
| 4429352 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 50.0 | 5.22e-01 | 99.0% | 91.1% |
| 3975044 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.64 | 47.0 | 5.20e-01 | 93.9% | 100.0% |
| 4319764 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.64 | 49.0 | 4.78e-01 | 98.0% | 72.7% |
| 4203993 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.64 | 55.0 | 5.61e-01 | 96.9% | 96.8% |
| 4063137 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.64 | 53.0 | 5.53e-01 | 95.9% | 97.8% |
| 4366483 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.63 | 51.0 | 5.40e-01 | 95.9% | 100.0% |
| 3387360 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.63 | 48.0 | 5.12e-01 | 94.9% | 95.3% |
| 4205951 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.63 | 53.0 | 5.44e-01 | 95.9% | 94.7% |
| 4666540 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.63 | 51.0 | 5.37e-01 | 92.9% | 100.0% |
| 4120682 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.63 | 55.0 | 5.47e-01 | 94.9% | 97.0% |
| 4678134 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.62 | 54.0 | 5.40e-01 | 95.9% | 93.0% |
| 3247934 | 1.1.7.41 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › UPF1_1B_dom | 0.61 | 53.0 | 5.38e-01 | 92.9% | 100.0% |
| 3181266 | 1.1.7.24 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 | 0.61 | 52.0 | 5.00e-01 | 93.9% | 100.0% |
| 5036802 | 205.1.1.1 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 | 0.61 | 44.0 | 3.91e-01 | 82.7% | 52.9% |
| 5034906 | 205.1.1.16 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 | 0.60 | 44.0 | 3.80e-01 | 82.7% | 49.0% |
| 5051220 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 51.0 | 5.30e-01 | 98.0% | 100.0% |
| 4010630 | 2004.1.1.10 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab | 0.59 | 50.0 | 3.28e-01 | 99.0% | 21.2% |
| 4946578 | 1.1.7.140 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF87 | 0.59 | 50.0 | 4.67e-01 | 91.8% | 100.0% |
| 4510320 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.58 | 48.0 | 4.98e-01 | 88.8% | 97.8% |
| 4936008 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.58 | 49.0 | 5.00e-01 | 90.8% | 100.0% |
| 4542692 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 47.0 | 5.03e-01 | 90.8% | 100.0% |
| 165654 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.58 | 39.0 | 4.39e-01 | 72.4% | 91.9% |
| 3172185 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.58 | 48.0 | 4.70e-01 | 92.9% | 86.4% |
| 3185321 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.57 | 42.0 | 4.67e-01 | 91.8% | 100.0% |
| 5057186 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 48.0 | 5.04e-01 | 94.9% | 100.0% |
| 5051927 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 50.0 | 4.71e-01 | 95.9% | 100.0% |
| 3770803 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.57 | 48.0 | 4.70e-01 | 96.9% | 83.6% |
| 4250193 | 4.1.1.78 ↗ | beta barrels › SH3 › SH3 › SH3 › TTD | 0.57 | 43.0 | 4.44e-01 | 99.0% | 86.7% |
| 3842363 | 1.1.5.76 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › CABIT | 0.56 | 48.0 | 4.66e-01 | 99.0% | 83.6% |
| 4412962 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.56 | 47.0 | 4.46e-01 | 92.9% | 83.5% |
| 4405469 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.55 | 48.0 | 4.88e-01 | 100.0% | 100.0% |
| 3672735 | 4.1.1.303 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus | 0.55 | 35.0 | 4.13e-01 | 74.5% | 98.5% |
| 3275255 | 11.1.4.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CBM_20 | 0.55 | 40.0 | 3.98e-01 | 83.7% | 75.0% |
| 1146571 | 5092.1.1.8 ↗ | beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › TAdV_Fibre-like_head | 0.55 | 44.0 | 4.02e-01 | 98.0% | 64.5% |
| 4508798 | 10.32.1.278 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Asp2 | 0.54 | 42.0 | 3.86e-01 | 100.0% | 62.2% |
| 3387521 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 41.0 | 4.21e-01 | 95.9% | 85.3% |
| 4927104 | 10.1.2.193 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › Thioredoxin_10 | 0.53 | 42.0 | 3.70e-01 | 94.9% | 56.1% |
| 3624157 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 40.0 | 4.10e-01 | 94.9% | 86.3% |
| 3887026 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 37.0 | 3.95e-01 | 95.9% | 87.1% |
| 3570368 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 40.0 | 4.00e-01 | 100.0% | 80.0% |
| 4161767 | 10.32.1.271 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › PF27237 | 0.51 | 41.0 | 3.68e-01 | 90.8% | 100.0% |
| 3593621 | 10.15.1.1 ↗ | beta sandwiches › jelly-roll › Smp-1-like › Smp-1-like › DUF1935 | 0.51 | 39.0 | 3.72e-01 | 83.7% | 80.8% |
| 4265943 | 219.1.1.4 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C2 | 0.51 | 44.0 | 3.20e-01 | 99.0% | 35.9% |
| 4662876 | 10.32.1.25 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › FlhE | 0.50 | 42.0 | 4.01e-01 | 93.9% | 95.0% |
| 3252659 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.50 | 39.0 | 4.01e-01 | 95.9% | 88.4% |