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IMGVR_UViG_3300028191_000511-3300028191-Ga0265595_10070922
Arc-VirIMGVR_UViG_3300028191_000511-3300028191-Ga0265595_10070922
Identity
- Kingdom:
- archaea
Quality
85.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-66
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1aalB00 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.71 | 37.0 | 3.93e-01 | 100.0% | 56.1% |
| 4bd9B01 | 4.10.410.10 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › Pancreatic trypsin inhibitor Kunitz domain | 0.66 | 35.0 | 3.78e-01 | 100.0% | 59.3% |
| 5o60c00 | 2.20.28.120 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Ribosomal protein L33 | 0.61 | 41.0 | 4.55e-01 | 96.9% | 93.9% |
| 7u32F02 | 2.30.30.10 | Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral | 0.58 | 42.0 | 4.56e-01 | 96.9% | 100.0% |
| 2drpA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.58 | 29.0 | 3.62e-01 | 95.4% | 82.4% |
| 4ijdA02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.58 | 28.0 | 3.73e-01 | 95.4% | 87.1% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 40.0 | 4.22e-01 | 96.9% | 87.5% |
| 1cyyA02 | 2.70.20.10 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Topoisomerase I, domain 3 | 0.56 | 46.0 | 3.92e-01 | 100.0% | 95.2% |
| 5z0uA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 40.0 | 3.23e-01 | 100.0% | 40.3% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.55 | 38.0 | 4.00e-01 | 76.9% | 82.5% |
| 1rfeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 39.0 | 3.17e-01 | 100.0% | 37.5% |
| 4o1sA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.55 | 45.0 | 3.50e-01 | 100.0% | 81.2% |
| 4fgoA00 | 3.10.620.30 | Alpha Beta › Roll › C8orf32 fold › | 0.54 | 43.0 | 3.12e-01 | 100.0% | 30.9% |
| 2fhqA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 41.0 | 3.28e-01 | 100.0% | 40.0% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 39.0 | 4.12e-01 | 100.0% | 91.4% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 39.0 | 3.06e-01 | 100.0% | 38.7% |
| 1r5tA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.50 | 38.0 | 3.00e-01 | 100.0% | 38.3% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4990489 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.74 | 53.0 | 5.76e-01 | 98.5% | 98.0% |
| 5020208 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.72 | 53.0 | 5.96e-01 | 93.8% | 100.0% |
| 3934581 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.69 | 36.0 | 4.18e-01 | 100.0% | 71.1% |
| 5057901 | 375.10.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc finger domain of DNA polymerase-alpha › Zinc finger domain of DNA polymerase-alpha | 0.67 | 42.0 | 4.68e-01 | 100.0% | 84.0% |
| 3932795 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.65 | 33.0 | 3.94e-01 | 96.9% | 75.0% |
| 4101646 | 375.1.1.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L33 | 0.62 | 43.0 | 4.66e-01 | 100.0% | 96.0% |
| 4258905 | 264.2.1.0 ↗ | beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain | 0.61 | 52.0 | 4.30e-01 | 100.0% | 94.4% |
| 4087736 | 375.1.1.3 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ribosomal_L33 | 0.61 | 42.0 | 4.58e-01 | 98.5% | 95.9% |
| 4031988 | 3769.1.1.0 ↗ | 0.60 | 33.0 | 3.73e-01 | 98.5% | 73.3% | |
| 5000687 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 41.0 | 4.32e-01 | 93.8% | 81.0% |
| 4026674 | 11.21.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein | 0.57 | 40.0 | 3.80e-01 | 100.0% | 61.3% |
| 3847767 | 304.9.1.129 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › NID, IFP_35_N | 0.57 | 35.0 | 3.29e-01 | 81.5% | 50.0% |
| 5029599 | 12.5.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related | 0.55 | 36.0 | 2.98e-01 | 100.0% | 34.4% |
| 3221714 | 382.1.1.20 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › PF29036 | 0.55 | 41.0 | 4.05e-01 | 100.0% | 77.1% |
| 3986740 | 101.1.2.380 ↗ | alpha arrays › HTH › HTH › winged helix domain › TraI_hel_assoc_N | 0.54 | 41.0 | 2.66e-01 | 83.1% | 49.9% |
| 4983458 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.54 | 44.0 | 3.49e-01 | 100.0% | 84.8% |
| 3961990 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.54 | 40.0 | 3.85e-01 | 100.0% | 69.3% |
| 5002632 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.54 | 43.0 | 3.37e-01 | 100.0% | 39.6% |
| 4234747 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.54 | 37.0 | 3.89e-01 | 76.9% | 81.0% |
| 3513417 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 48.0 | 3.72e-01 | 100.0% | 84.3% |
| 3392095 | 2492.1.1.1 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 | 0.53 | 40.0 | 3.12e-01 | 100.0% | 36.0% |
| 3567558 | 304.9.1.63 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_PARP14_3 | 0.53 | 47.0 | 4.17e-01 | 100.0% | 97.9% |
| 3256398 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 38.0 | 3.44e-01 | 100.0% | 53.7% |
| 3940003 | 375.3.1.0 ↗ | few secondary structure elements › Rubredoxin-like › CSL zinc finger › CSL zinc finger | 0.53 | 34.0 | 3.37e-01 | 96.9% | 58.7% |
| 4366971 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.53 | 35.0 | 3.76e-01 | 76.9% | 83.6% |
| 4096474 | 4203.1.1.1 ↗ | few secondary structure elements › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 redox switch-like › HSP33 | 0.52 | 35.0 | 3.80e-01 | 76.9% | 92.0% |
| 3578551 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.52 | 45.0 | 3.93e-01 | 98.5% | 87.0% |
| 3433011 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.51 | 45.0 | 3.72e-01 | 100.0% | 66.7% |
| 3295672 | 1.1.2.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Barwin | 0.50 | 40.0 | 4.00e-01 | 100.0% | 84.3% |
| 11432 | 2492.1.1.1 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1 | 0.50 | 38.0 | 3.00e-01 | 100.0% | 38.3% |