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IMGVR_UViG_3300028193_000163-3300028193-Ga0265594_10051077

Arc-Vir

IMGVR_UViG_3300028193_000163-3300028193-Ga0265594_10051077

Identity

Kingdom:
archaea

Quality

77.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 84-160
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1se8A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.79 45.0 3.90e-01 98.7% 39.6%
2vw9B00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 41.0 3.65e-01 98.7% 41.9%
6rupA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 40.0 3.54e-01 98.7% 39.6%
3e56A00 6.20.180.10 Special › Other non-globular › Ubiquitin-like (UB roll) › 0.61 44.0 4.47e-01 97.4% 80.0%
3hvnA02 3.30.1040.20 Alpha Beta › 2-Layer Sandwich › Carboxypeptidase Inhibitor; Chain A › 0.60 34.0 3.91e-01 100.0% 79.2%
3k8aB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 34.0 3.10e-01 100.0% 42.7%
3en2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 32.0 3.01e-01 98.7% 45.1%
3ccfA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 44.0 3.24e-01 100.0% 95.0%
6czfA01 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.50 41.0 2.83e-01 94.8% 65.7%
ECOD (10)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3593723 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.60 49.0 3.12e-01 90.9% 57.8%
3701268 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.59 48.0 3.15e-01 92.2% 56.2%
4562263 3435.1.1.1 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › RdgC 0.54 47.0 3.21e-01 100.0% 31.2%
3963537 3435.1.1.1 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › RdgC 0.54 46.0 3.14e-01 97.4% 32.4%
4886009 3435.1.1.1 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › RdgC 0.54 47.0 3.19e-01 100.0% 32.7%
4208499 3435.1.1.1 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › RdgC 0.53 46.0 3.16e-01 100.0% 39.1%
4159356 2004.1.1.429 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 0.53 40.0 2.63e-01 85.7% 41.5%
5018889 2003.1.5.81 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.51 45.0 3.09e-01 100.0% 70.2%
4947843 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.50 43.0 3.73e-01 98.7% 80.8%
331637 3435.1.1.1 ↗ a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC › RdgC 0.50 44.0 2.96e-01 100.0% 26.5%
D2 medium residues 4-83
PDB
Domain cluster: rep: IMGVR_UViG_3300028169_000139-3300028169-Ga0268279_10049381__DFULL