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IMGVR_UViG_3300028275_000183-3300028275-Ga0255174_10010662
Arc-VirIMGVR_UViG_3300028275_000183-3300028275-Ga0255174_10010662
Identity
- Kingdom:
- archaea
Quality
88.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 99-172
Domain cluster:
rep: PH2015_20_scaffold_1_prodigal-single.1__X__X__00020__D217-300
D2
medium
residues 2-66
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8ai9B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 46.0 | 4.05e-01 | 90.8% | 73.1% |
| 4h33A00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 39.0 | 3.57e-01 | 73.8% | 76.9% |
| 2ftpA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 47.0 | 3.13e-01 | 100.0% | 94.0% |
| 5okaA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.54 | 46.0 | 2.84e-01 | 100.0% | 38.7% |
| 3h4cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 39.0 | 3.53e-01 | 81.5% | 72.9% |
| 3f8tA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 42.0 | 2.82e-01 | 90.8% | 37.7% |
| 2no4A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.53 | 38.0 | 3.75e-01 | 81.5% | 100.0% |
| 4yurA02 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 39.0 | 3.23e-01 | 89.2% | 82.2% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3328539 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.65 | 47.0 | 2.91e-01 | 76.9% | 25.6% |
| 3249883 | 101.1.10.7 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C | 0.58 | 43.0 | 3.52e-01 | 80.0% | 64.0% |
| 1276701 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.54 | 40.0 | 3.32e-01 | 84.6% | 58.5% |
| 4016535 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.53 | 38.0 | 3.40e-01 | 78.5% | 69.0% |
| 5070171 | 2004.1.1.157 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF1611 | 0.51 | 44.0 | 3.08e-01 | 100.0% | 94.3% |
| 4861235 | 3078.1.1.1 ↗ | extended segments › RNA polymerase PB1 C-terminal fragment › RNA polymerase PB1 C-terminal fragment › RNA polymerase PB1 C-terminal fragment › Flu_PB1 | 0.51 | 36.0 | 3.92e-01 | 80.0% | 85.7% |
| 3327541 | 170.1.1.8 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C › Retrotran_gag_3 | 0.50 | 41.0 | 3.83e-01 | 96.9% | 72.2% |