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IMGVR_UViG_3300028275_000436-3300028275-Ga0255174_10024303
Arc-VirIMGVR_UViG_3300028275_000436-3300028275-Ga0255174_10024303
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-91
Domain cluster:
rep: CAKLQF020000011.1__CAH1085983.1__SAMEA5780031_02231__00031__D106-155
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5c8qB02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.89 | 65.0 | 7.24e-01 | 83.1% | 97.8% |
| 4b8vA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.82 | 68.0 | 6.56e-01 | 96.6% | 79.1% |
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.82 | 61.0 | 6.62e-01 | 86.4% | 95.9% |
| 4b8vA02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.81 | 64.0 | 5.97e-01 | 88.1% | 68.5% |
| 2mtzA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.81 | 60.0 | 6.37e-01 | 86.4% | 92.0% |
| 2djpA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.79 | 63.0 | 5.72e-01 | 91.5% | 64.9% |
| 4bopB00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.75 | 51.0 | 3.74e-01 | 71.2% | 46.7% |
| 4bouA00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.72 | 50.0 | 3.77e-01 | 72.9% | 50.4% |
| 6dx5A00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.67 | 50.0 | 3.60e-01 | 81.4% | 66.3% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.66 | 57.0 | 5.05e-01 | 100.0% | 86.4% |
| 3mlfE00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 40.0 | 3.52e-01 | 86.4% | 47.7% |
| 7osfB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 49.0 | 3.49e-01 | 100.0% | 47.2% |
| 3edpA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 41.0 | 3.86e-01 | 78.0% | 73.7% |
| 4ijaA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 40.0 | 3.98e-01 | 78.0% | 90.5% |
| 3sluB01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 46.0 | 4.15e-01 | 100.0% | 86.8% |
| 1ft9A02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 43.0 | 3.95e-01 | 86.4% | 89.9% |
| 2h6bA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 45.0 | 4.03e-01 | 100.0% | 90.6% |
| 4lhfA00 | 6.10.200.10 | Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox | 0.53 | 37.0 | 3.49e-01 | 78.0% | 73.4% |
| 7pzaA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 39.0 | 3.62e-01 | 86.4% | 83.7% |
| 3d0sA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 39.0 | 3.69e-01 | 88.1% | 91.3% |
| 2fmyA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.54e-01 | 86.4% | 90.2% |
| 4i2oA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.61e-01 | 88.1% | 87.5% |
| 4pg4A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 37.0 | 2.90e-01 | 84.7% | 75.2% |
| 2x51A06 | 3.30.70.1590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 37.0 | 3.58e-01 | 79.7% | 98.5% |
ECOD (84)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004560 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.95 | 80.0 | 8.27e-01 | 91.5% | 94.5% |
| 3955076 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.93 | 68.0 | 7.77e-01 | 78.0% | 100.0% |
| 3587382 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.91 | 75.0 | 7.79e-01 | 91.5% | 94.5% |
| 3979943 | 101.15.1.3 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X | 0.90 | 72.0 | 7.81e-01 | 84.7% | 100.0% |
| 3324708 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.89 | 71.0 | 7.05e-01 | 89.8% | 81.7% |
| 3452845 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.89 | 67.0 | 7.00e-01 | 88.1% | 85.5% |
| 2047861 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.89 | 70.0 | 7.10e-01 | 89.8% | 84.5% |
| 2124917 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.88 | 69.0 | 4.90e-01 | 89.8% | 30.4% |
| 3320955 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.88 | 69.0 | 6.68e-01 | 89.8% | 75.4% |
| 4177991 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.88 | 73.0 | 7.52e-01 | 91.5% | 94.5% |
| 4404011 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 67.0 | 6.32e-01 | 93.2% | 68.6% |
| 3426433 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 68.0 | 6.80e-01 | 89.8% | 81.7% |
| 3458171 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 69.0 | 6.66e-01 | 91.5% | 76.9% |
| 3898121 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 64.0 | 6.60e-01 | 88.1% | 85.5% |
| 4680476 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 71.0 | 6.67e-01 | 96.6% | 75.7% |
| 4491522 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.84 | 65.0 | 6.46e-01 | 88.1% | 80.0% |
| 4995817 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.84 | 77.0 | 7.22e-01 | 100.0% | 90.0% |
| 3190144 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.84 | 64.0 | 6.98e-01 | 88.1% | 98.0% |
| 3337328 | 101.15.1.14 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 | 0.84 | 72.0 | 4.49e-01 | 91.5% | 19.0% |
| 3670445 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.84 | 71.0 | 4.34e-01 | 93.2% | 17.1% |
| 3367888 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.84 | 69.0 | 6.48e-01 | 88.1% | 75.7% |
| 4128043 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.84 | 61.0 | 6.82e-01 | 83.1% | 100.0% |
| 4492966 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 64.0 | 6.60e-01 | 88.1% | 87.3% |
| 3417561 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 70.0 | 4.34e-01 | 93.2% | 18.0% |
| 2124918 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 70.0 | 5.21e-01 | 93.2% | 39.0% |
| 3359799 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.83 | 70.0 | 5.24e-01 | 93.2% | 39.8% |
| 1759182 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 64.0 | 6.82e-01 | 91.5% | 96.1% |
| 3720958 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 64.0 | 6.88e-01 | 91.5% | 98.0% |
| 2895417 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.82 | 67.0 | 6.11e-01 | 88.1% | 67.5% |
| 3250125 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 65.0 | 6.34e-01 | 88.1% | 76.9% |
| 3165082 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 60.0 | 6.45e-01 | 84.7% | 92.0% |
| 4022922 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 62.0 | 6.46e-01 | 88.1% | 87.3% |
| 3974521 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 69.0 | 6.90e-01 | 93.2% | 88.3% |
| 3232962 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 65.0 | 6.52e-01 | 91.5% | 83.3% |
| 3964920 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 60.0 | 6.07e-01 | 88.1% | 79.3% |
| 4137479 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 62.0 | 5.46e-01 | 88.1% | 56.5% |
| 4149501 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.81 | 61.0 | 6.58e-01 | 88.1% | 96.0% |
| 3981327 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.81 | 66.0 | 6.90e-01 | 89.8% | 96.3% |
| 3448128 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.81 | 68.0 | 5.12e-01 | 91.5% | 40.7% |
| 4069716 | 101.15.1.14 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 | 0.80 | 67.0 | 5.21e-01 | 93.2% | 44.2% |
| 3303205 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 62.0 | 6.22e-01 | 86.4% | 81.7% |
| 3691772 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 63.0 | 6.48e-01 | 91.5% | 90.9% |
| 3636417 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.80 | 63.0 | 6.62e-01 | 88.1% | 94.3% |
| 3365578 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.80 | 68.0 | 6.08e-01 | 91.5% | 70.0% |
| 3234671 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 61.0 | 6.29e-01 | 88.1% | 87.3% |
| 3970261 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.80 | 64.0 | 6.67e-01 | 86.4% | 94.4% |
| 3656643 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.79 | 67.0 | 5.02e-01 | 93.2% | 40.0% |
| 3183656 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 64.0 | 6.18e-01 | 86.4% | 78.5% |
| 3188069 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.79 | 64.0 | 6.18e-01 | 86.4% | 78.5% |
| 3247196 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.78 | 59.0 | 5.96e-01 | 88.1% | 80.0% |
| 2809236 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 68.0 | 6.75e-01 | 96.6% | 95.2% |
| 2042916 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 62.0 | 6.50e-01 | 93.2% | 94.4% |
| 3636424 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 61.0 | 6.30e-01 | 88.1% | 90.9% |
| 3375189 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.77 | 64.0 | 6.06e-01 | 91.5% | 75.7% |
| 3666767 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.77 | 63.0 | 5.14e-01 | 91.5% | 49.5% |
| 3651054 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.77 | 63.0 | 4.61e-01 | 91.5% | 34.2% |
| 3595402 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.76 | 55.0 | 6.15e-01 | 76.3% | 100.0% |
| 3716764 | 101.15.1.12 ↗ | alpha arrays › HTH › LysM domain › LysM domain › PF30403 | 0.76 | 63.0 | 6.28e-01 | 89.8% | 91.7% |
| 3611431 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.75 | 61.0 | 6.15e-01 | 89.8% | 91.7% |
| 3191020 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.74 | 60.0 | 6.06e-01 | 93.2% | 88.3% |
| 3240624 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.73 | 56.0 | 5.77e-01 | 93.2% | 89.1% |
| 3608297 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.73 | 52.0 | 5.79e-01 | 76.3% | 100.0% |
| 4015813 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.73 | 54.0 | 5.45e-01 | 86.4% | 80.0% |
| 3989756 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.73 | 54.0 | 5.87e-01 | 83.1% | 100.0% |
| 3189252 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.72 | 54.0 | 5.27e-01 | 86.4% | 73.8% |
| 3963519 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.72 | 63.0 | 6.10e-01 | 96.6% | 87.7% |
| 3647286 | 101.15.1.7 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM_RLK | 0.72 | 60.0 | 5.56e-01 | 93.2% | 80.0% |
| 4008890 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.67 | 53.0 | 5.42e-01 | 88.1% | 94.5% |
| 1649977 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.66 | 57.0 | 5.01e-01 | 100.0% | 84.4% |
| 3968457 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.64 | 55.0 | 4.96e-01 | 100.0% | 89.4% |
| 3164837 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.62 | 53.0 | 4.90e-01 | 100.0% | 91.3% |
| 4100614 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.61 | 44.0 | 4.48e-01 | 79.7% | 96.4% |
| 4472807 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.60 | 44.0 | 4.07e-01 | 81.4% | 66.3% |
| 4994965 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.60 | 50.0 | 3.41e-01 | 100.0% | 38.0% |
| 4561443 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.60 | 43.0 | 4.36e-01 | 81.4% | 90.0% |
| 3946974 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.59 | 46.0 | 3.92e-01 | 89.8% | 66.7% |
| 4666406 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.58 | 43.0 | 4.25e-01 | 83.1% | 76.9% |
| 3729235 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.58 | 44.0 | 4.41e-01 | 84.7% | 86.7% |
| 4100484 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.58 | 41.0 | 4.23e-01 | 79.7% | 96.4% |
| 3386481 | 3953.1.1.0 ↗ | a+b two layers › Csd3 N-terminal domain › Csd3 N-terminal domain › Csd3 N-terminal domain | 0.57 | 46.0 | 4.08e-01 | 100.0% | 83.0% |
| 4447894 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.56 | 42.0 | 4.29e-01 | 84.7% | 94.5% |
| 4962664 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.55 | 41.0 | 3.31e-01 | 86.4% | 71.1% |
| 4946879 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.54 | 39.0 | 3.19e-01 | 81.4% | 46.2% |
| 163606 | 101.1.2.142 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_Crp_2 | 0.52 | 38.0 | 3.62e-01 | 86.4% | 90.1% |