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IMGVR_UViG_3300028275_000657-3300028275-Ga0255174_10016777
Arc-VirIMGVR_UViG_3300028275_000657-3300028275-Ga0255174_10016777
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-156
Domain cluster:
rep: AJ972879.2__CCE26242.1__X__00220__D5-114
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20274.5 best | cREC_REC | 75.8 | 4.70e-21 | 75.5% | 100.0% |
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ehdA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.67 | 55.0 | 4.91e-01 | 86.8% | 88.4% |
| 1yo6F00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.65 | 54.0 | 4.66e-01 | 87.4% | 87.0% |
| 4gx0B04 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 45.0 | 4.88e-01 | 85.4% | 85.5% |
| 4impA02 | 3.40.50.11460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 51.0 | 4.60e-01 | 87.4% | 70.6% |
| 3kp1A04 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.62 | 47.0 | 4.77e-01 | 86.8% | 79.3% |
| 5unlB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.62 | 57.0 | 4.71e-01 | 100.0% | 74.0% |
| 2vk2A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 46.0 | 4.46e-01 | 85.4% | 70.3% |
| 1yt8A01 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.61 | 37.0 | 4.42e-01 | 90.7% | 91.8% |
| 1hyhA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 50.0 | 5.14e-01 | 85.4% | 97.9% |
| 2d4aD01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 50.0 | 5.16e-01 | 85.4% | 100.0% |
| 2bd0A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 55.0 | 4.76e-01 | 98.0% | 83.8% |
| 6r8gA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 49.0 | 5.11e-01 | 85.4% | 99.3% |
| 3pffA05 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.61 | 47.0 | 4.52e-01 | 86.8% | 70.3% |
| 1efaA03 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 43.0 | 4.45e-01 | 85.4% | 76.9% |
| 3ucxA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 55.0 | 4.61e-01 | 100.0% | 76.4% |
| 5vegB00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.60 | 50.0 | 5.04e-01 | 86.8% | 90.6% |
| 2kl3A01 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.60 | 35.0 | 4.05e-01 | 88.7% | 81.1% |
| 5dcaA09 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 47.0 | 4.23e-01 | 84.8% | 67.1% |
| 5vazA02 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.58 | 36.0 | 3.91e-01 | 88.7% | 72.7% |
| 1nvtA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 45.0 | 4.67e-01 | 84.1% | 85.9% |
| 1ccwB01 | 3.20.20.240 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Methylmalonyl-CoA mutase | 0.58 | 50.0 | 3.63e-01 | 93.4% | 70.7% |
| 4lgvA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 47.0 | 4.34e-01 | 86.8% | 89.9% |
| 4mzyA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 44.0 | 4.32e-01 | 82.8% | 95.2% |
| 3pzgA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 47.0 | 3.59e-01 | 90.1% | 92.4% |
| 6canA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 45.0 | 3.65e-01 | 86.8% | 69.5% |
| 1nv8A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 45.0 | 4.11e-01 | 84.8% | 77.2% |
| 2xkbL00 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.55 | 44.0 | 3.30e-01 | 83.4% | 88.4% |
| 5gujA02 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.55 | 38.0 | 4.17e-01 | 76.2% | 84.8% |
| 6whcA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 45.0 | 4.01e-01 | 87.4% | 73.5% |
| 3zidB00 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.55 | 46.0 | 3.48e-01 | 88.1% | 51.5% |
| 2hu8A02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 44.0 | 3.72e-01 | 86.8% | 79.7% |
| 4w7wA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 45.0 | 3.58e-01 | 88.7% | 66.5% |
| 3h8lA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.55 | 44.0 | 4.45e-01 | 84.8% | 86.1% |
| 1t0iA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.54 | 50.0 | 4.63e-01 | 97.4% | 87.6% |
| 2p9bA03 | 3.40.50.10910 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Amidohydrolase | 0.54 | 42.0 | 4.62e-01 | 84.1% | 100.0% |
| 7lldA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.54 | 43.0 | 3.66e-01 | 82.8% | 53.8% |
| 2au3A03 | 3.40.1360.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › | 0.54 | 37.0 | 4.08e-01 | 75.5% | 84.7% |
| 6n8eA04 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.54 | 43.0 | 3.78e-01 | 87.4% | 90.9% |
| 6y1xB01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 46.0 | 3.97e-01 | 94.7% | 82.9% |
| 1w8gA00 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.53 | 41.0 | 3.57e-01 | 80.8% | 74.3% |
| 2lbtA00 | 3.30.1330.60 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain | 0.53 | 37.0 | 3.95e-01 | 75.5% | 83.2% |
| 3dlcA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 42.0 | 3.77e-01 | 86.1% | 73.5% |
| 1bdgA01 | 3.40.367.20 | Alpha Beta › 3-Layer(aba) Sandwich › Hexokinase; domain 1 › | 0.53 | 43.0 | 3.50e-01 | 86.8% | 79.2% |
| 3hzrA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 39.0 | 3.29e-01 | 100.0% | 44.9% |
| 2wqpA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 44.0 | 3.64e-01 | 91.4% | 83.0% |
| 4pscA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 41.0 | 3.61e-01 | 83.4% | 80.5% |
| 4cgyA01 | 3.40.50.140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 42.0 | 4.02e-01 | 88.1% | 84.1% |
| 2ww5A02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 42.0 | 3.81e-01 | 88.7% | 79.2% |
| 1ez0B01 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 38.0 | 2.97e-01 | 77.5% | 55.4% |
| 3bdvA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.50 | 42.0 | 3.88e-01 | 88.1% | 80.6% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3638719 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.75 | 56.0 | 5.33e-01 | 87.4% | 67.6% |
| 3979976 | 2003.1.1.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Mannitol_dh | 0.66 | 56.0 | 4.59e-01 | 90.7% | 76.0% |
| 4287165 | 2003.1.1.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Mannitol_dh | 0.66 | 56.0 | 4.66e-01 | 92.1% | 78.5% |
| 4099181 | 2003.1.1.26 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Glyco_hydro_4 | 0.66 | 53.0 | 5.10e-01 | 84.8% | 98.2% |
| 3280764 | 2003.1.1.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Mannitol_dh | 0.65 | 56.0 | 4.55e-01 | 92.1% | 74.3% |
| 1337993 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.62 | 47.0 | 4.79e-01 | 86.8% | 79.3% |
| None | — | 0.62 | 57.0 | 4.71e-01 | 100.0% | 78.0% | |
| 4466206 | 2006.1.3.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 | 0.62 | 40.0 | 4.37e-01 | 86.1% | 78.4% |
| 3784189 | 2003.1.1.20 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase | 0.60 | 54.0 | 4.20e-01 | 100.0% | 69.9% |
| 2849646 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.60 | 52.0 | 4.16e-01 | 93.4% | 61.2% |
| 3265224 | 2007.5.1.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL | 0.59 | 49.0 | 4.39e-01 | 90.1% | 84.9% |
| 5054421 | 2007.2.1.14 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_3 | 0.59 | 44.0 | 4.47e-01 | 100.0% | 78.7% |
| 5034740 | 247.1.1.11 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B_2 | 0.59 | 49.0 | 4.07e-01 | 87.4% | 98.8% |
| 3500810 | 2008.1.1.68 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PND | 0.59 | 38.0 | 4.20e-01 | 86.8% | 81.7% |
| 5074713 | 2007.2.1.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › FMN_red | 0.59 | 49.0 | 4.66e-01 | 88.7% | 81.1% |
| 4370367 | 2003.1.1.120 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA | 0.58 | 47.0 | 4.51e-01 | 87.4% | 73.7% |
| 3586844 | 2003.1.1.26 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Glyco_hydro_4 | 0.58 | 53.0 | 4.97e-01 | 98.7% | 99.5% |
| 5060752 | 2003.1.6.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like | 0.58 | 48.0 | 4.38e-01 | 87.4% | 86.9% |
| 3885165 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.58 | 47.0 | 3.32e-01 | 88.1% | 51.0% |
| None | — | 0.58 | 35.0 | 3.59e-01 | 86.8% | 61.4% | |
| 4972609 | 7574.1.1.0 ↗ | a/b three-layered sandwiches › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) › Thiamin diphosphate-binding fold (THDP-binding) | 0.57 | 49.0 | 4.43e-01 | 93.4% | 83.7% |
| 3690760 | 2003.1.1.42 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD_binding_2 | 0.57 | 47.0 | 4.30e-01 | 88.7% | 72.5% |
| 4887123 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.56 | 37.0 | 4.02e-01 | 80.8% | 79.2% |
| 4055211 | 2007.2.5.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Rhodanese/Cell cycle control phosphatase › Rhodanese | 0.56 | 36.0 | 3.99e-01 | 89.4% | 80.5% |
| 1254323 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.55 | 46.0 | 4.26e-01 | 88.1% | 91.0% |
| 5047786 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 44.0 | 3.33e-01 | 85.4% | 57.6% |
| 3286057 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.55 | 43.0 | 3.99e-01 | 82.1% | 95.1% |
| 4041525 | 2006.1.3.6 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_2 | 0.54 | 37.0 | 4.10e-01 | 86.8% | 88.3% |
| 4084160 | 2004.1.1.201 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_26 | 0.53 | 43.0 | 3.85e-01 | 87.4% | 92.6% |
| 4933350 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.52 | 35.0 | 3.79e-01 | 90.7% | 79.7% |
| 1833564 | 2484.1.1.42 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_2 | 0.52 | 43.0 | 3.56e-01 | 88.7% | 85.1% |
| 4270708 | 2006.1.3.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 | 0.52 | 37.0 | 3.88e-01 | 73.5% | 85.2% |
| 4229738 | 2006.1.3.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain | 0.52 | 36.0 | 4.05e-01 | 84.1% | 94.7% |
| 3931589 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.51 | 42.0 | 3.64e-01 | 86.8% | 69.1% |
| 3709068 | 207.1.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 | 0.51 | 40.0 | 3.01e-01 | 85.4% | 33.3% |
| 5058697 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.51 | 46.0 | 3.57e-01 | 98.7% | 56.1% |
| 3741985 | 2484.1.1.7 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ribosomal_S11 | 0.51 | 37.0 | 4.03e-01 | 97.4% | 92.0% |
| 3607589 | 7522.1.1.3 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › OxoGdeHyase_C | 0.51 | 37.0 | 3.97e-01 | 74.8% | 96.9% |
| 4326257 | 2006.1.3.7 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Toprim domain › Toprim_4 | 0.51 | 35.0 | 3.99e-01 | 83.4% | 93.8% |
| 5051290 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.51 | 45.0 | 3.81e-01 | 99.3% | 80.8% |
| 3990835 | 2002.1.1.45 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_31_2nd | 0.51 | 39.0 | 3.11e-01 | 82.1% | 86.8% |
| 4624086 | 2004.1.1.41 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ADK | 0.50 | 40.0 | 3.80e-01 | 86.8% | 93.6% |
| 1240464 | 2002.1.1.16 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase | 0.50 | 44.0 | 3.53e-01 | 97.4% | 95.8% |