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IMGVR_UViG_3300028326_000299-3300028326-Ga0268263_1000016141
Arc-VirIMGVR_UViG_3300028326_000299-3300028326-Ga0268263_1000016141
Identity
- Kingdom:
- archaea
Quality
81.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-62
Domain cluster:
rep: rifcsphigho2_12_scaffold_16_prodigal-single.1__X__X__00146__D4-59
Pfam (4)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF14520.13 best | HHH_5 | 43.2 | 6.20e-11 | 88.3% | 93.0% |
| PF07647.25 | SAM_2 | 24.9 | 2.60e-05 | 85.0% | 68.2% |
| PF21999.3 | IMS_HHH_1 | 27.2 | 6.20e-06 | 76.7% | 64.1% |
| PF00536.38 | SAM_1 | 25.9 | 1.50e-05 | 75.0% | 64.1% |
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zj8A04 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.89 | 72.0 | 7.43e-01 | 86.7% | 93.0% |
| 1y88A02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.88 | 77.0 | 7.79e-01 | 96.7% | 96.6% |
| 2i1qA01 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.87 | 79.0 | 7.86e-01 | 100.0% | 98.4% |
| 3k1rB00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.85 | 78.0 | 7.25e-01 | 100.0% | 82.4% |
| 3osnA03 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.83 | 68.0 | 6.22e-01 | 90.0% | 68.8% |
| 5jrtA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.83 | 73.0 | 7.16e-01 | 96.7% | 93.8% |
| 1z00B00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.80 | 67.0 | 5.97e-01 | 96.7% | 65.5% |
| 1x9xA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.77 | 68.0 | 6.77e-01 | 98.3% | 95.2% |
| 3idwA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.77 | 67.0 | 6.52e-01 | 98.3% | 95.5% |
| 1cokA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.77 | 68.0 | 6.55e-01 | 100.0% | 89.7% |
| 2ahoB02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.76 | 66.0 | 5.73e-01 | 96.7% | 79.1% |
| 2kivA01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.76 | 64.0 | 6.38e-01 | 95.0% | 95.2% |
| 2q0zX02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.76 | 63.0 | 6.42e-01 | 96.7% | 94.8% |
| 2rp5A00 | 1.10.150.830 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.75 | 65.0 | 5.28e-01 | 100.0% | 58.1% |
| 1mpgA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.74 | 62.0 | 5.05e-01 | 96.7% | 66.9% |
| 2nnwA02 | 1.10.287.4070 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.70 | 58.0 | 4.54e-01 | 91.7% | 44.1% |
| 2gh1A02 | 1.10.150.350 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.67 | 59.0 | 4.84e-01 | 98.3% | 88.9% |
| 4jndA01 | 1.10.1740.220 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › | 0.65 | 54.0 | 4.20e-01 | 91.7% | 55.4% |
| 2qgsB01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.65 | 45.0 | 4.06e-01 | 75.0% | 98.9% |
| 2k9lA00 | 1.10.10.1330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RNA polymerase sigma-54 factor, core-binding domain | 0.64 | 53.0 | 4.93e-01 | 93.3% | 76.3% |
| 2vqcA00 | 1.10.10.1470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like | 0.62 | 47.0 | 4.55e-01 | 98.3% | 72.9% |
| 2da3A01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.60 | 42.0 | 4.57e-01 | 75.0% | 100.0% |
| 3cymA03 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.60 | 49.0 | 4.45e-01 | 96.7% | 75.0% |
| 3e3vA03 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 45.0 | 4.71e-01 | 81.7% | 98.2% |
| 2da7A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.59 | 45.0 | 4.31e-01 | 85.0% | 71.8% |
| 3vayA02 | 1.20.120.1600 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 51.0 | 4.53e-01 | 100.0% | 81.6% |
| 2w96A02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 42.0 | 3.57e-01 | 85.0% | 84.1% |
| 1c9bA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.56 | 45.0 | 3.97e-01 | 93.3% | 69.1% |
| 1cnt200 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.56 | 48.0 | 3.82e-01 | 98.3% | 64.6% |
| 4a0zA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 42.0 | 4.30e-01 | 88.3% | 93.2% |
| 4a18Q01 | 1.10.10.1760 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ribosomal protein L36 | 0.56 | 48.0 | 4.64e-01 | 96.7% | 89.9% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.55 | 48.0 | 4.02e-01 | 98.3% | 61.2% |
| 4jrrB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 45.0 | 3.29e-01 | 96.7% | 32.6% |
| 2jaqA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 48.0 | 3.39e-01 | 100.0% | 46.0% |
| 3pvuA02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.54 | 39.0 | 3.57e-01 | 76.7% | 75.0% |
| 2k5eA00 | 1.10.3910.10 | Mainly Alpha › Orthogonal Bundle › SP0561-like › SP0561-like | 0.54 | 38.0 | 3.66e-01 | 96.7% | 63.0% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 46.0 | 3.99e-01 | 98.3% | 63.8% |
| 2f2cA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 43.0 | 3.63e-01 | 98.3% | 55.0% |
ECOD (83)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4999572 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.95 | 85.0 | 8.52e-01 | 96.7% | 93.3% |
| 5026932 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.93 | 76.0 | 7.96e-01 | 86.7% | 94.5% |
| 4944083 | 102.1.1.182 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › Rad51 | 0.93 | 82.0 | 7.70e-01 | 93.3% | 81.4% |
| 5073600 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.92 | 79.0 | 8.00e-01 | 95.0% | 91.7% |
| 4976088 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.90 | 77.0 | 7.74e-01 | 91.7% | 98.3% |
| 5081275 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.90 | 79.0 | 7.68e-01 | 95.0% | 86.2% |
| 5035235 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.90 | 84.0 | 7.91e-01 | 100.0% | 85.7% |
| 4989822 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.90 | 77.0 | 8.00e-01 | 96.7% | 100.0% |
| 4996121 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.89 | 81.0 | 7.10e-01 | 98.3% | 70.6% |
| 5053399 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.89 | 79.0 | 6.96e-01 | 96.7% | 69.4% |
| 3410797 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.88 | 76.0 | 7.65e-01 | 93.3% | 98.3% |
| 4970148 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.88 | 75.0 | 7.33e-01 | 91.7% | 92.3% |
| 2951 | 102.1.1.52 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › AF1548-like_C | 0.88 | 77.0 | 7.79e-01 | 96.7% | 96.6% |
| 5005154 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.87 | 71.0 | 6.08e-01 | 88.3% | 57.8% |
| 3258611 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.87 | 78.0 | 7.41e-01 | 100.0% | 84.3% |
| 4965166 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.87 | 75.0 | 7.52e-01 | 96.7% | 93.3% |
| 5076446 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.86 | 78.0 | 7.25e-01 | 100.0% | 88.0% |
| 4960209 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.86 | 74.0 | 7.42e-01 | 98.3% | 93.3% |
| 3591519 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.86 | 78.0 | 7.38e-01 | 100.0% | 90.0% |
| 4932604 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.86 | 79.0 | 7.09e-01 | 100.0% | 75.0% |
| 4937419 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.86 | 69.0 | 7.16e-01 | 88.3% | 94.5% |
| None | — | 0.85 | 75.0 | 7.52e-01 | 98.3% | 96.7% | |
| 4981272 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.85 | 68.0 | 7.06e-01 | 85.0% | 98.2% |
| 3875720 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.85 | 76.0 | 7.61e-01 | 96.7% | 98.3% |
| 4199114 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.85 | 73.0 | 7.38e-01 | 96.7% | 95.0% |
| 3717161 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.85 | 76.0 | 6.91e-01 | 100.0% | 78.8% |
| 3918265 | 102.1.1.16 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_2 | 0.85 | 76.0 | 7.27e-01 | 100.0% | 88.6% |
| 4943380 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.84 | 71.0 | 7.33e-01 | 95.0% | 100.0% |
| 3174667 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.84 | 72.0 | 7.26e-01 | 96.7% | 93.3% |
| 3994878 | 102.1.1.78 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › EPH_SAM | 0.84 | 74.0 | 7.00e-01 | 95.0% | 82.9% |
| None | — | 0.84 | 68.0 | 6.69e-01 | 90.0% | 81.5% | |
| 4940020 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.84 | 75.0 | 6.57e-01 | 100.0% | 68.5% |
| 3758015 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.84 | 71.0 | 7.37e-01 | 95.0% | 100.0% |
| 4597170 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.84 | 76.0 | 7.20e-01 | 100.0% | 85.7% |
| 4982189 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.83 | 72.0 | 6.85e-01 | 96.7% | 81.4% |
| 144073 | 102.1.1.16 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_2 | 0.83 | 75.0 | 6.73e-01 | 100.0% | 75.6% |
| 5065201 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.83 | 72.0 | 7.01e-01 | 96.7% | 87.7% |
| 4942883 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.83 | 66.0 | 6.92e-01 | 93.3% | 94.5% |
| 4015442 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.83 | 73.0 | 6.73e-01 | 96.7% | 88.0% |
| 5052765 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.83 | 74.0 | 7.09e-01 | 100.0% | 88.6% |
| 3630665 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.83 | 75.0 | 6.95e-01 | 100.0% | 80.0% |
| 3184108 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.82 | 72.0 | 7.28e-01 | 98.3% | 96.7% |
| 3554607 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.82 | 74.0 | 6.71e-01 | 100.0% | 77.5% |
| 4518665 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.82 | 67.0 | 6.54e-01 | 88.3% | 84.6% |
| 4128865 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.82 | 69.0 | 5.97e-01 | 91.7% | 67.8% |
| 4975251 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.82 | 72.0 | 7.28e-01 | 100.0% | 98.3% |
| 5026911 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.82 | 72.0 | 7.02e-01 | 96.7% | 96.9% |
| 3872535 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.82 | 74.0 | 6.47e-01 | 100.0% | 69.3% |
| 4073019 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.82 | 73.0 | 6.58e-01 | 98.3% | 78.8% |
| 5079736 | 102.3.1.1 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain › EIF_2_alpha | 0.82 | 69.0 | 6.36e-01 | 91.7% | 92.0% |
| 3189901 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.81 | 73.0 | 6.95e-01 | 100.0% | 91.4% |
| 4946451 | 102.1.1.182 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › Rad51 | 0.81 | 75.0 | 7.11e-01 | 100.0% | 98.6% |
| 3182525 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.81 | 71.0 | 6.62e-01 | 98.3% | 90.7% |
| 3325385 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.81 | 70.0 | 7.05e-01 | 96.7% | 95.0% |
| 4266846 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.81 | 70.0 | 6.86e-01 | 95.0% | 87.7% |
| 3619609 | 102.1.1.16 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_2 | 0.81 | 69.0 | 6.54e-01 | 95.0% | 80.0% |
| 4356957 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.81 | 69.0 | 5.86e-01 | 96.7% | 65.0% |
| 3760127 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.80 | 68.0 | 5.65e-01 | 95.0% | 57.1% |
| 3688549 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.80 | 69.0 | 6.93e-01 | 96.7% | 95.0% |
| 3518655 | 102.1.1.78 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › EPH_SAM | 0.80 | 70.0 | 6.38e-01 | 100.0% | 73.8% |
| 3559956 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.80 | 70.0 | 6.63e-01 | 100.0% | 86.3% |
| 4649652 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.80 | 68.0 | 5.84e-01 | 95.0% | 63.2% |
| 4642767 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.79 | 68.0 | 5.77e-01 | 96.7% | 65.0% |
| 4039032 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.79 | 68.0 | 6.27e-01 | 93.3% | 77.3% |
| 5044794 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.79 | 67.0 | 6.56e-01 | 95.0% | 92.3% |
| 3617028 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.79 | 69.0 | 6.30e-01 | 100.0% | 78.8% |
| 3608219 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.78 | 62.0 | 6.41e-01 | 86.7% | 96.4% |
| 3403272 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.77 | 67.0 | 6.54e-01 | 98.3% | 89.2% |
| 3736644 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.77 | 67.0 | 6.27e-01 | 98.3% | 88.0% |
| 3919158 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.77 | 63.0 | 6.37e-01 | 91.7% | 95.0% |
| 4949724 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.76 | 62.0 | 5.95e-01 | 91.7% | 91.4% |
| 5035887 | 102.3.1.0 ↗ | alpha arrays › HhH/H2TH › eIF2alpha middle domain › eIF2alpha middle domain | 0.76 | 63.0 | 5.65e-01 | 91.7% | 81.2% |
| 5022597 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.75 | 64.0 | 6.26e-01 | 98.3% | 87.7% |
| 180653 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.75 | 64.0 | 4.43e-01 | 96.7% | 34.3% |
| 3787212 | 102.1.1.20 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › IGR | 0.75 | 65.0 | 5.37e-01 | 96.7% | 55.2% |
| 3876949 | 592.1.1.0 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain | 0.75 | 59.0 | 6.10e-01 | 90.0% | 96.4% |
| 5059609 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.75 | 63.0 | 5.58e-01 | 96.7% | 65.6% |
| 3984116 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.75 | 63.0 | 4.43e-01 | 96.7% | 40.5% |
| 4635442 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.74 | 61.0 | 5.90e-01 | 93.3% | 81.2% |
| 3932442 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.73 | 60.0 | 5.75e-01 | 91.7% | 78.6% |
| 5003639 | 2.21.1.0 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) | 0.66 | 52.0 | 3.84e-01 | 86.7% | 41.3% |
| 4126690 | 101.35.1.4 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH3 | 0.65 | 47.0 | 4.95e-01 | 76.7% | 96.4% |
| 3934732 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.57 | 50.0 | 4.88e-01 | 98.3% | 93.8% |
D2
high
residues 67-112
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qr0A01 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.71 | 60.0 | 4.45e-01 | 97.8% | 42.4% |
| 4kh7B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.71 | 53.0 | 3.79e-01 | 78.3% | 33.1% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.70 | 57.0 | 4.51e-01 | 89.1% | 45.7% |
| 2p8eA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.64 | 51.0 | 3.19e-01 | 91.3% | 21.2% |
| 4f0cA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.64 | 50.0 | 3.51e-01 | 84.8% | 29.7% |
| 2ckoA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.60 | 47.0 | 3.03e-01 | 95.7% | 28.4% |
| 4dvjB01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.60 | 51.0 | 3.40e-01 | 97.8% | 62.8% |
| 1sq5C00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 52.0 | 3.17e-01 | 100.0% | 16.4% |
| 2n00A00 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.58 | 43.0 | 3.52e-01 | 84.8% | 77.9% |
| 2qhoD00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.53 | 35.0 | 3.55e-01 | 71.7% | 69.4% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1005577 | 3682.1.1.1 ↗ | alpha duplicates or obligate multimers › IcmQ dimerization domain › IcmQ dimerization domain › IcmQ dimerization domain › Dot_icm_IcmQ | 0.80 | 53.0 | 5.09e-01 | 76.1% | 61.5% |
| 1153843 | 109.1.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 | 0.71 | 53.0 | 3.71e-01 | 78.3% | 30.7% |
| 4010389 | 109.1.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C | 0.70 | 52.0 | 3.69e-01 | 78.3% | 31.7% |
| 3982776 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.69 | 51.0 | 3.24e-01 | 78.3% | 19.0% |
| None | — | 0.57 | 41.0 | 4.05e-01 | 89.1% | 72.2% | |
| 3936603 | 2484.5.1.2 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH | 0.55 | 44.0 | 3.28e-01 | 93.5% | 44.6% |
| 3916711 | 5087.3.1.1 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1C › Lipovitellin LV-1C › Vit_open_b-sht | 0.53 | 42.0 | 2.56e-01 | 100.0% | 25.4% |